RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 RYKP34925 604 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 IDUAP35475 653 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 CDKN2CP42773 168 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 IDH2P48735 452 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC35A1P78382 337 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 EPS8Q12929 822 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 STK11Q15831 433 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 SYPL1Q16563 259 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 ATG16L1Q676U5 607 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 PAQR6Q6TCH4 344 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 TMEM108Q6UXF1 575 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 DNM1P46Q6ZS02 220 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 ZNF621Q6ZSS3 439 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 ANKFN1Q8N957 763 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 KBTBD8Q8NFY9 601 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 WDR60Q8WVS4 1066 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 CNOT9Q92600 299 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 MUS81Q96NY9 551 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 AMBRA1Q9C0C7 1298 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 ADAM19Q9H013 955 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 SDR39U1Q9NRG7 319 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 PARPBPQ9NWS1 579 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 OSGIN1Q9UJX0 560 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC9A8Q9Y2E8 581 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 MAGED1Q9Y5V3 778 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 ROS1P08922 2347 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 DNHD1Q96M86 4753 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 TMED7-TICAM2A0A0A6YYA0 188 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 CDHR4A6H8M9 788 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 C9JVG2 144 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 PDLIM1O00151 329 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 KLF11O14901 512 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 SMAD7O15105 426 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC22A3O75751 556 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 NR2F1P10589 423 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 PTAFRP25105 342 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 MVDP53602 400 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 TNK1Q13470 666 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC17A1Q14916 467 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 NRF1Q16656 503 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 LIN52Q52LA3 116 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 ALKBH2Q6NS38 261 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 KLHL17Q6TDP4 642 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 ATG4DQ86TL0 474 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 PEX5LQ8IYB4 626 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 TMEM45BQ96B21 275 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 PAIP2Q9BPZ3 127 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 INPP5KQ9BT40 448 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 TRAF4Q9BUZ4 470 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 SF3B5Q9BWJ5 86 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 OR11A1Q9GZK7 315 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 ALG2Q9H553 416 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 WDR55Q9H6Y2 383 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 CISD1Q9NZ45 108 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 NPAP1Q9NZP6 1156 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 ZIM2Q9NZV7 527 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 TMED7Q9Y3B3 224 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC25A15Q9Y619 301 aa11.19□□□□□ -0.62
HNRNPC-221ENST00000555883 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 AP3D1O14617 1153 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 ABCD4O14678 606 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 CD8AP01732 235 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 C1QCP02747 245 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 TACR3P29371 465 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 NTF4P34130 210 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 CRISP3P54108 245 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 CDH11P55287 796 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 NME5P56597 212 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 OR2B6P58173 313 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 PPP2R2BQ00005 443 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 MAPK11Q15759 364 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 GABRA6Q16445 453 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 COX20Q5RI15 118 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 RNF220Q5VTB9 566 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 CCDC103Q8IW40 242 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 UBE2J2Q8N2K1 259 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 NEUROG1Q92886 237 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 SLC35B4Q969S0 331 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 SLCO5A1Q9H2Y9 848 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 RMND5AQ9H871 391 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 FLVCR1Q9Y5Y0 555 aa11.18□□□□□ -0.62
HNRNPC-221ENST00000555883 A0A096LPI6 279 aa11.17□□□□□ -0.62
HNRNPC-221ENST00000555883 CIB4A0PJX0 185 aa11.17□□□□□ -0.62
HNRNPC-221ENST00000555883 TMEM72A0PK05 275 aa11.17□□□□□ -0.62
HNRNPC-221ENST00000555883 CCT8L1PA6NM43 557 aa11.17□□□□□ -0.62
HNRNPC-221ENST00000555883 RAMP1O60894 148 aa11.17□□□□□ -0.62
HNRNPC-221ENST00000555883 RAD51DO75771 328 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms