RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ATP6V1C2Q8NEY4 427 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 OR4C15Q8NGM1 316 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM255BQ8WV15 326 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 KLHL15Q96M94 604 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 FUZQ9BT04 418 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-221ENST00000555773 PAQR5Q9NXK6 330 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-221ENST00000555773 RRP15Q9Y3B9 282 aaKnown RBP11.23□□□□□ -0.61
SHMT2-221ENST00000555773 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 TRBV4-1A0A0J9YWV2 114 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 SH3PXD2BA1X283 911 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 E2F6O75461 281 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 AHSA1O95433 338 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 FPR1P21462 350 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 PTGS2P35354 604 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 CARD18P57730 90 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 RPS3AP61247 264 aaKnown RBP11.22□□□□□ -0.61
SHMT2-221ENST00000555773 EGR4Q05215 589 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 FOXD4Q12950 439 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-221ENST00000555773 RIPK1Q13546 671 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 MFSD13AQ14CX5 517 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 SF3B4Q15427 424 aaKnown RBP eCLIP11.22□□□□□ -0.617e-19■■■■□ 22
SHMT2-221ENST00000555773 MICAQ29983 383 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 EXOC3L2Q2M3D2 409 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 TMPPEQ6ZT21 453 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 AMIGO2Q86SJ2 522 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 HIPK1Q86Z02 1210 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 PQLC1Q8N2U9 271 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 MFSD8Q8NHS3 518 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 OSTF1Q92882 214 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 WDYHV1Q96HA8 205 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 PKP2Q99959 881 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 PRDM14Q9GZV8 571 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 NTN4Q9HB63 628 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 TIGARQ9NQ88 270 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-221ENST00000555773 SPRR3Q9UBC9 169 aa11.22□□□□□ -0.61
SHMT2-221ENST00000555773 A0A0J9YW62 118 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ZC3H12DA2A288 527 aaKnown RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ARRDC5A6NEK1 342 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 EIF1AYO14602 144 aaKnown RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 DNPH1O43598 174 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MGRN1O60291 552 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CCNB2O95067 398 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 PMS2P2O95744 297 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 BAG2O95816 211 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MT-ATP6P00846 226 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OPN1LWP04000 364 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 HOXD4P09016 255 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 FUT4P22083 530 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 SFTPDP35247 375 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 IDUAP35475 653 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MLLT10P55197 1068 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CTBP2P56545 445 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CLDN18P56856 261 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CLDN20P56880 219 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 RAC3P60763 192 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CSNK2A1P68400 391 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 PRKCDQ05655 676 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 RBPJQ06330 500 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MYBPHQ13203 477 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 GXYLT1Q4G148 440 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 SHQ1Q6PI26 577 aaKnown RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 TBPL2Q6SJ96 375 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 GFRALQ6UXV0 394 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 GGNQ86UU5 652 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ZDHHC13Q8IUH4 622 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 SVOPLQ8N434 492 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OR4K5Q8NGD3 323 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OR2V1Q8NHB1 315 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OR5K1Q8NHB7 308 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 PIGXQ8TBF5 258 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 GIPC3Q8TF64 312 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 LIPHQ8WWY8 451 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 SMPDL3BQ92485 455 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 TAAR8Q969N4 342 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MIB2Q96AX9 1013 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 KTI12Q96EK9 354 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ADGRG7Q96K78 797 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 ARL5BQ96KC2 179 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OR5B2Q96R09 309 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 TAPBPLQ9BX59 468 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OSBPL10Q9BXB5 764 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 OR11A1Q9GZK7 315 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM185BQ9H7F4 350 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 MEPEQ9NQ76 525 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 VNN3Q9NY84 501 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 U3KQV3 271 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms