RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FBP2O00757 339 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 ZNF208O43345 1280 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 RAMP1O60894 148 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 GCM2O75603 506 aaPredicted RBP18.21■□□□□ 0.51
VTI1B-205ENST00000555543 GOSR1O95249 250 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 CLK1P49759 484 aaKnown RBP18.21■□□□□ 0.51
VTI1B-205ENST00000555543 ARFIP2P53365 341 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 SCARB2Q14108 478 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 WBP2NLQ6ICG8 309 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.21■□□□□ 0.51
VTI1B-205ENST00000555543 MTDHQ86UE4 582 aaKnown RBP18.21■□□□□ 0.51
VTI1B-205ENST00000555543 PTOV1Q86YD1 416 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 GABRG1Q8N1C3 465 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 DDIT4LQ96D03 193 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 TMEM181Q9P2C4 612 aa18.21■□□□□ 0.51
VTI1B-205ENST00000555543 ZNF716A6NP11 495 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 CASKO14936 926 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 THBDP07204 575 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 CRYGSP22914 178 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 FKBP2P26885 142 aaKnown RBP18.2■□□□□ 0.5
VTI1B-205ENST00000555543 AQP1P29972 269 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 OR2B6P58173 313 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 BNIP2Q12982 314 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 NFYCQ13952 458 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 CAPRIN1Q14444 709 aaKnown RBP18.2■□□□□ 0.5
VTI1B-205ENST00000555543 TESK1Q15569 626 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 ZSWIM7Q19AV6 140 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 GLIPR1L2Q4G1C9 344 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 CXorf67Q86X51 503 aaPredicted RBP18.2■□□□□ 0.5
VTI1B-205ENST00000555543 CCDC103Q8IW40 242 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 C3orf49Q96BT1 292 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 TACO1Q9BSH4 297 aaKnown RBP18.2■□□□□ 0.5
VTI1B-205ENST00000555543 ARMC7Q9H6L4 198 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 PLEKHF2Q9H8W4 249 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 ST6GALNAC2Q9UJ37 374 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 MAP1AP78559 2803 aaPredicted RBP18.2■□□□□ 0.5
VTI1B-205ENST00000555543 HIVEP1P15822 2718 aa18.2■□□□□ 0.5
VTI1B-205ENST00000555543 IGKV3D-15A0A087WSY6 115 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 ZNF724A8MTY0 619 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 DNPH1O43598 174 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 TPST1O60507 370 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 PSMB1P20618 241 aaKnown RBP18.19■□□□□ 0.5
VTI1B-205ENST00000555543 PRKAR1BP31321 381 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 OR3A2P47893 321 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 COPZ1P61923 177 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 TSC22D1Q15714 1073 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 DHRS4L2Q6PKH6 230 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 ZHX1-C8orf76Q96EF9 292 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 SAR1AQ9NR31 198 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 ZNF226Q9NYT6 803 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 PRSS50Q9UI38 385 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 TRAPPC4Q9Y296 219 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 PLEKHA6Q9Y2H5 1048 aa18.19■□□□□ 0.5
VTI1B-205ENST00000555543 TEP1Q99973 2627 aaKnown RBP18.19■□□□□ 0.5
VTI1B-205ENST00000555543 SLC6A2P23975 617 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 CXCR1P25024 350 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 MDH1P40925 334 aaKnown RBP18.18■□□□□ 0.5
VTI1B-205ENST00000555543 MAP2K6P52564 334 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 IST1P53990 364 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 H3F3AP84243 136 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 KLF10Q13118 480 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 ATG4DQ86TL0 474 aaPredicted RBP18.18■□□□□ 0.5
VTI1B-205ENST00000555543 KRT73Q86Y46 540 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 HIPK4Q8NE63 616 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 SLC35B4Q969S0 331 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 ZNF317Q96PQ6 595 aaPredicted RBP18.18■□□□□ 0.5
VTI1B-205ENST00000555543 ACTR6Q9GZN1 396 aa18.18■□□□□ 0.5
VTI1B-205ENST00000555543 TMEM229AB2RXF0 380 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 FXYD1O00168 92 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 FPR1P21462 350 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 HTR2AP28223 471 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 LOXP28300 417 aaPredicted RBP18.17■□□□□ 0.5
VTI1B-205ENST00000555543 NTF4P34130 210 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 IDUAP35475 653 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PCBP3P57721 371 aaKnown RBP18.17■□□□□ 0.5
VTI1B-205ENST00000555543 SLC35A1P78382 337 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PDK3Q15120 406 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 CYP51A1Q16850 503 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 TRMT5Q32P41 509 aaKnown RBP18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PAMR1Q6UXH9 720 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 GALNT5Q7Z7M9 940 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PIGXQ8TBF5 258 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 C10orf82Q8WW14 230 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PIK3IP1Q96FE7 263 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 HS3ST6Q96QI5 342 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 WFDC6Q9BQY6 131 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 POTEKPQ9BYX7 375 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 KAT8Q9H7Z6 458 aaKnown RBP18.17■□□□□ 0.5
VTI1B-205ENST00000555543 CCM2LQ9NUG4 571 aaPredicted RBP18.17■□□□□ 0.5
VTI1B-205ENST00000555543 KLHL14Q9P2G3 628 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PRDM4Q9UKN5 801 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 GPR52Q9Y2T5 361 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 PRR14LQ5THK1 2151 aa18.17■□□□□ 0.5
VTI1B-205ENST00000555543 F8P00451 2351 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 LIPT2A6NK58 231 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 ADAP00813 363 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 PPP3CBP16298 524 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 SLC16A1P53985 500 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 DMTNQ08495 405 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 CEACAM7Q14002 265 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms