RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 CCINQ13939 588 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 PAPD4Q6PIY7 484 aaKnown RBP11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 GDPD3Q7L5L3 318 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR6N1Q8NGY5 312 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 C4orf36Q96KX1 117 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 BTBD2Q9BX70 525 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 B3GNT4Q9C0J1 378 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 UBQLN3Q9H347 655 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 SP140LQ9H930 580 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 SYNPO2LQ9H987 977 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 PPP4R1LQ9P1A2 415 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 PSORS1C1Q9UIG5 152 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 DTX4Q9Y2E6 619 aa11.29□□□□□ -0.6
ARHGEF40-206ENST00000555232 TLCD2A6NGC4 264 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SLC16A6O15403 523 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SRPX2O60687 465 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 KHDRBS3O75525 346 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 RENP00797 406 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 CAPZBP47756 277 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 RPS25P62851 125 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 PPP1R3BQ86XI6 285 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 FYTTD1Q96QD9 318 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 NARFLQ9H6Q4 476 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 A4GALTQ9NPC4 353 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 TRIM36Q9NQ86 728 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 POLHQ9Y253 713 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ANXA2P2A6NMY6 339 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ANXA2P07355 339 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR3A3P47888 321 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 KRR1Q13601 381 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ALG10Q5BKT4 473 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 HES5Q5TA89 166 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SLC6A19Q695T7 634 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 METAP1DQ6UB28 335 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 KRT77Q7Z794 578 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 LSMEM1Q8N8F7 131 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 HINT3Q9NQE9 182 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 PEX16Q9Y5Y5 336 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 FMO6PO60774 539 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 ITGAMP11215 1152 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 MAGEB1P43366 347 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 TRA2BP62995 288 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SGCAQ16586 387 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 PGGHGQ32M88 737 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR13C5Q8NGS8 318 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 C9orf43Q8TAL5 461 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 DHRS9Q9BPW9 319 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 APMAPQ9HDC9 416 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
ARHGEF40-206ENST00000555232 MEIS3P1A6NDR6 274 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR6C70A6NIJ9 312 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 ACOD1A6NK06 481 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 HLA-DPB1P04440 258 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 WNT1P04628 370 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 ETV5P41161 510 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 ETV1P50549 477 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 BICRALQ6AI39 1079 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 ESX1Q8N693 406 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 GRPEL2Q8TAA5 225 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 ZNF578Q96N58 590 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 OR5B2Q96R09 309 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 GPA33Q99795 319 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 CHIAQ9BZP6 476 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 RANGRFQ9HD47 186 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 TMEM138Q9NPI0 162 aa11.27□□□□□ -0.6
ARHGEF40-206ENST00000555232 MYLKQ15746 1914 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 IDSB3KWA1 339 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 PRODHO43272 600 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 CTNSO60931 367 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 HTR1AP08908 422 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 GMFBP60983 142 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 PDE7AQ13946 482 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 SYT14P1Q58G82 188 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 C1orf216Q8TAB5 229 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 SYT4Q9H2B2 425 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 NUFIP1Q9UHK0 495 aaKnown RBP11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 A4GNTQ9UNA3 340 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 R4GN57 208 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.61
ARHGEF40-206ENST00000555232 TMEM72A0PK05 275 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms