RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 DCTN4Q9UJW0 460 aa11.45□□□□□ -0.58
XRCC3-212ENST00000555231 HDGFL3Q9Y3E1 203 aa11.45□□□□□ -0.58
XRCC3-212ENST00000555231 FLVCR1Q9Y5Y0 555 aa11.45□□□□□ -0.58
XRCC3-212ENST00000555231 RNF103-CHMP3A0A140T963 221 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 LRP5LA4QPB2 252 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 DUXAA6NLW8 204 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 ANKRD28O15084 1053 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 WIPF1O43516 503 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 TRIM13O60858 407 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SKAP2O75563 359 aaPredicted RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 LYPLA1O75608 230 aaPredicted RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 AK1P00568 194 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SHBGP04278 402 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 FGF4P08620 206 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 OR12D1P0DN82 309 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 IMPDH2P12268 514 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 ZNF23P17027 643 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 PRPS1P60891 318 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SNRPD2P62316 118 aaKnown RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 RUNX1T1Q06455 604 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 ATP6AP1LQ52LC2 224 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 HIKESHIQ53FT3 197 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 XKR7Q5GH72 579 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 C6orf136Q5SQH8 315 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 TYW3Q6IPR3 259 aaKnown RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 VHLLQ6RSH7 139 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 C16orf62Q7Z3J2 963 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SLC46A3Q7Z3Q1 461 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 GRINAQ7Z429 371 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SPATA19Q7Z5L4 167 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 RIMKLAQ8IXN7 391 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 GSPT2Q8IYD1 628 aaKnown RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 NATD1Q8N6N6 113 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 FNDC5Q8NAU1 212 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 FAM71CQ8NEG0 241 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 MNS1Q8NEH6 495 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 RAB8BQ92930 207 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 BHLHE41Q9C0J9 482 aaPredicted RBP11.44□□□□□ -0.58
XRCC3-212ENST00000555231 ZNF350Q9GZX5 532 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 TMEM181Q9P2C4 612 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 DYSFO75923 2080 aa11.44□□□□□ -0.58
XRCC3-212ENST00000555231 TMED7-TICAM2A0A0A6YYA0 188 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 IGHV1-18A0A0C4DH31 117 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 TMEM72A0PK05 275 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 CLDN24A6NM45 220 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 AP3D1O14617 1153 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 DNPH1O43598 174 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 TCF21O43680 179 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 ITGA2P17301 1181 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 KRT4P19013 534 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 ALDH3A1P30838 453 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 IL2RGP31785 369 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 IDH2P48735 452 aaKnown RBP11.43□□□□□ -0.58
XRCC3-212ENST00000555231 H3F3AP84243 136 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 PLAURQ03405 335 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 PGS1Q32NB8 556 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 OR4F3Q6IEY1 312 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 IFT20Q8IY31 132 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 XAGE5Q8WWM1 108 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 ZG16BQ96DA0 208 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 MECRQ9BV79 373 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 PARPBPQ9NWS1 579 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 MID2Q9UJV3 735 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 SLC35A3Q9Y2D2 325 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 TMED7Q9Y3B3 224 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 WDR45Q9Y484 360 aa11.43□□□□□ -0.58
XRCC3-212ENST00000555231 ZC3H12DA2A288 527 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 WNT11O96014 354 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 G6PDP11413 515 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 PRPS1L1P21108 318 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 MPGP29372 298 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 SERPINF1P36955 418 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 SRP14P37108 136 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 CLK1P49759 484 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 TUBA1BP68363 451 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 TUBA4AP68366 448 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 SLC35A1P78382 337 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 TGFBR3Q03167 851 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 FUT5Q11128 374 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 SLC17A1Q14916 467 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 TNFAIP8L2Q6P589 184 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 ZCCHC23Q6ZST2 131 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 TUBA1AQ71U36 451 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 RFLNBQ8N5W9 214 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 CNOT9Q92600 299 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 ZNF385AQ96PM9 386 aaKnown RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-212ENST00000555231 PLA2G12AQ9BZM1 189 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 CA10Q9NS85 328 aa11.42□□□□□ -0.58
XRCC3-212ENST00000555231 EXD2Q9NVH0 621 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms