RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SQSTM1Q13501 440 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 EXOSC7Q15024 291 aaKnown RBP13.02□□□□□ -0.33
VTI1B-204ENST00000554659 NXNL2Q5VZ03 156 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SVBPQ8N300 66 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 B3GNT2Q9NY97 397 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 GLTPQ9NZD2 209 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 ADAM18Q9Y3Q7 739 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 A0A0D9SG52 128 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 PSMB5P28074 263 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 PTGER1P34995 402 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 CHRNEQ04844 493 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 KDM4DQ6B0I6 523 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SLCO4C1Q6ZQN7 724 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 MBOAT2Q6ZWT7 520 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 MFSD9Q8NBP5 474 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 LCATP04180 440 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 RAB5CP51148 216 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 ZNF169Q14929 603 aaPredicted RBP13.02□□□□□ -0.33
VTI1B-204ENST00000554659 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 OR51D1Q8NGF3 324 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 CLSTN3Q9BQT9 956 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 PAPOLGQ9BWT3 736 aaKnown RBP13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 TMEM38AQ9H6F2 299 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
VTI1B-204ENST00000554659 NME7Q9Y5B8 376 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 SLC16A7O60669 478 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 PPP3CBP16298 524 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 GPX2P18283 190 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 PSMB1P20618 241 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 IL32P24001 234 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HLA-DMAP28067 261 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ACY1Q03154 408 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 MRPL2Q5T653 305 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ZNF296Q8WUU4 475 aaPredicted RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 RNF186Q9NXI6 227 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 UGT2A1Q9Y4X1 527 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HMX2A2RU54 273 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CD300LBA8K4G0 201 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 PRAMEF26H0Y7S4 382 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 H3BML4 177 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CSO75390 466 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 UBL3O95164 117 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HLA-AP01891 365 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 DUSP7Q16829 419 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 TAS1R1Q7RTX1 841 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ZFP82Q8N141 532 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR51Q1Q8NH59 317 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 C22orf15Q8WYQ4 148 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 TBC1D20Q96BZ9 403 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 NICN1Q9BSH3 213 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 NIPAL2Q9H841 368 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ACKR4Q9NPB9 350 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 UBQLN4Q9NRR5 601 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 POLHQ9Y253 713 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 AIPO00170 330 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CPNE6O95741 557 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 VEGFCP49767 419 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 MELKQ14680 651 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HIST2H3PS2Q5TEC6 136 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CD163Q86VB7 1156 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR13C2Q8NGS9 318 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 TXNDC15Q96J42 360 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 MICU1Q9BPX6 476 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 QRSL1Q9H0R6 528 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 NRIP3Q9NQ35 241 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 PGAP2Q9UHJ9 254 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 TTLL8A6PVC2 850 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 SYT5O00445 386 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR2T7P0C7T2 308 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CR2P20023 1033 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 HLA-FP30511 346 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 ERVK-16P61578 105 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 RNF4P78317 190 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 CNN3Q15417 329 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR7A5Q15622 319 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 XKR7Q5GH72 579 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 MCATQ8IVS2 390 aaKnown RBP13.01□□□□□ -0.33
VTI1B-204ENST00000554659 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR2T27Q8NH04 317 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 OR5B2Q96R09 309 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms