RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PKIBQ9C010 78 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 PRSS22Q9GZN4 317 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLC5A7Q9GZV3 580 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MAGEH1Q9H213 219 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 FAM83DQ9H4H8 585 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TRABDQ9H4I3 376 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NT5DC2Q9H857 520 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF430Q9H8G1 570 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 POLR1BQ9H9Y6 1135 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 MYNNQ9NPC7 610 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM138Q9NPI0 162 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 NECTIN3Q9NQS3 549 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 CHRAC1Q9NRG0 131 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 FAM212BQ9NTI7 297 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TMLHEQ9NVH6 421 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 C14orf105Q9NVL8 296 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 GTSE1Q9NYZ3 720 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 LRWD1Q9UFC0 647 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SMPXQ9UHP9 88 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 STUB1Q9UNE7 303 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 ADAM18Q9Y3Q7 739 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 HSPB11Q9Y547 144 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 WIF1Q9Y5W5 379 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 SLCO1B1Q9Y6L6 691 aa4.06□□□□□ -1.76
ATXN3-227ENST00000554491 TEP1Q99973 2627 aaKnown RBP4.06□□□□□ -1.76
ATXN3-227ENST00000554491 WDR81Q562E7 1941 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DMXL2Q8TDJ6 3036 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TRAV34A0A0B4J273 112 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PNMA8CA0A1B0GUJ8 204 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 A0A1B0GW55 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FAM230AA0A1W2PPH8 454 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MGAT4DA6NG13 374 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 URADA6NGE7 173 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 AGAP14A8MT82 685 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MAGEB17A8MXT2 336 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 M0QYT0 321 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 AIPO00170 330 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 BHLHE40O14503 412 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 BCAT2O15382 392 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC16A3O15427 465 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FLRT2O43155 660 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PRPF4O43172 522 aaKnown RBP eCLIP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FAM189A1O60320 539 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MRPS14O60783 128 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LYPLA1O75608 230 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 VAPBO95292 243 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TGFAP01135 160 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 GH1P01241 217 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 IFNA17P01571 189 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PCCBP05166 539 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ALPLP05186 524 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FGF2P09038 288 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L2P0CJ85 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L3P0CJ86 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L4P0CJ87 422 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L5P0CJ88 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L6P0CJ89 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4L7P0CJ90 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SCGB1A1P11684 91 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ETS1P14921 441 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SPNP16150 400 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ENGP17813 658 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PVALBP20472 110 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MSR1P21757 451 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 UQCRC2P22695 453 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MYF6P23409 242 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC6A1P30531 599 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 GCH1P30793 250 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 BRCC3P46736 316 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 KCNJ1P48048 391 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 KCNJ3P48549 501 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 RAB5CP51148 216 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FGF8P55075 233 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ERVS71-1P61550 626 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 IL5RAQ01344 420 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PRKCDQ05655 676 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TWF1Q12792 350 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MAD2L1Q13257 205 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 GPR17Q13304 367 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FASTKQ14296 549 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC17A1Q14916 467 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ARL6IP1Q15041 203 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC9A3R2Q15599 337 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR8G1Q15617 311 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LPAL2Q16609 132 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 VPS26BQ4G0F5 336 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 AKIRIN2Q53H80 203 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF667Q5HYK9 610 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 KHDRBS2Q5VWX1 349 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 NKAIN2Q5VXU1 208 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LEMD1Q68G75 181 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LAMTOR1Q6IAA8 161 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR8G2PQ6IF36 304 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PGBD2Q6P3X8 592 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PLET1Q6UQ28 207 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SCIMPQ6UWF3 145 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 CES3Q6UWW8 571 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FAM83HQ6ZRV2 1179 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms