RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 MGAT4BQ9UQ53 548 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 BTRCQ9Y297 605 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 SLC9A8Q9Y2E8 581 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 NDUFAF1Q9Y375 327 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 DHRS7Q9Y394 339 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 RNF11Q9Y3C5 154 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 TIMM22Q9Y584 194 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 AP4S1Q9Y587 144 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 ASCC3Q8N3C0 2202 aaKnown RBP4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 PIKFYVEQ9Y2I7 2098 aa4.74□□□□□ -1.65
MTHFD1-206ENST00000554353 PCNX2A6NKB5 2137 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TRBV5-4A0A0C4DH59 114 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SYCE1LA8MT33 242 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 IQCF5A8MTL0 148 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 C9JVG2 144 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 NR5A2O00482 541 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 STX7O15400 261 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 HSPA12AO43301 675 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TBL1XO60907 577 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 VPS26AO75436 327 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 RSL1D1O76021 490 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PGLSO95336 258 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TOMM40O96008 361 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 EGFP01133 1207 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TFAP2AP05549 437 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PABPC4LP0CB38 370 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PRPS2P11908 318 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 F3P13726 295 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 GFAPP14136 432 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 DDX5P17844 614 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 RPS3P23396 243 aaKnown RBP eCLIP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 IL12AP29459 219 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 C21orf33P30042 268 aaPredicted RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 HOXD3P31249 432 aaPredicted RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 HOXA6P31267 233 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CSKP41240 450 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TTPAP49638 278 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 GPR143P51810 404 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SLC7A2P52569 658 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 HNRNPFP52597 415 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 DIO3P55073 304 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ERVPABLB-1P60509 514 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CACNG1Q06432 222 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 APOFQ13790 326 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SSX2Q16385 188 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CNPY1Q3B7I2 92 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF260Q3ZCT1 412 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 VPS26BQ4G0F5 336 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 NKAIN1Q4KMZ8 207 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ATP13A5Q4VNC0 1218 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 LIN52Q52LA3 116 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PHYHD1Q5SRE7 291 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 C6orf52Q5T4I8 152 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PIP5KL1Q5T9C9 394 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CARD17Q5XLA6 110 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SIGIRRQ6IA17 410 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 METTL2BQ6P1Q9 378 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PRMT9Q6P2P2 845 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 DEGS2Q6QHC5 323 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SBSNQ6UWP8 590 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF600Q6ZNG1 722 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZBTB49Q6ZSB9 765 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 Q6ZSR9 355 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 DPPA4Q7L190 304 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ARPINQ7Z6K5 226 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TSPAN33Q86UF1 283 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CHERPQ8IWX8 916 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CPNE9Q8IYJ1 553 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 APCDD1Q8J025 514 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 COMMD1Q8N668 190 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ANKFN1Q8N957 763 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 OR52B4Q8NGK2 314 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 OR8J1Q8NGP2 316 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 LKAAEAR1Q8TD35 194 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CANT1Q8WVQ1 401 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 MRPS31Q92665 395 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ESAMQ96AP7 390 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 METTL2AQ96IZ6 378 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 LMLNQ96KR4 655 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF597Q96LX8 424 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 LRFN5Q96NI6 719 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF382Q96SR6 550 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SLC29A1Q99808 456 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 HOPXQ9BPY8 73 aaPredicted RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 C19orf43Q9BQ61 176 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 FEM1AQ9BSK4 669 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 SPATA16Q9BXB7 569 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PPP1R3EQ9H7J1 279 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF696Q9H7X3 374 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TREM1Q9NP99 234 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 ARMC1Q9NVT9 282 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 DUS2Q9NX74 493 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 PKD2L2Q9NZM6 624 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TMCO1Q9UM00 188 aa4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 TNRC6BQ9UPQ9 1833 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-206ENST00000554353 CACNA1GO43497 2377 aa4.72□□□□□ -1.65
MTHFD1-206ENST00000554353 IGF2RP11717 2491 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms