RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ARHGDIGQ99819 225 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 UCK1Q9HA47 277 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 CNIH4Q9P003 139 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 A0A1B0GVC2 190 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 A6NIN4 97 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 PRAF2O60831 178 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 TFP02787 698 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ALDOBP05062 364 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 LPLP06858 475 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 HOXB2P14652 356 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 NFYAP23511 347 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 CALCRP30988 508 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 MPIP34949 423 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 MMP15P51511 669 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SNTB2Q13425 540 aaKnown RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ETFDHQ16134 617 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 TMEM44Q2T9K0 475 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 EOGTQ5NDL2 527 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SLC27A4Q6P1M0 643 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 IL20RBQ6UXL0 311 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 TMEM184AQ6ZMB5 413 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 KRT77Q7Z794 578 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 NR2C2APQ86WQ0 139 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SFTPA2Q8IWL1 248 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 STPG2Q8N412 459 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 EIF4E3Q8N5X7 224 aaKnown RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF527Q8NB42 609 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ZCCHC10Q8TBK6 192 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SCARB1Q8WTV0 552 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SPRYD4Q8WW59 207 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ASB12Q8WXK4 309 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 DIO2Q92813 273 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 DDOQ99489 341 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 GAL3ST1Q99999 423 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ACTR10Q9NZ32 417 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ING1Q9UK53 422 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 RASD1Q9Y272 281 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 COLEC10Q9Y6Z7 277 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF593O00488 134 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SIGLEC6O43699 453 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ITGA10O75578 1167 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 HPXP02790 462 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 FCER2P06734 321 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 FABP1P07148 127 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 CD3GP09693 182 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 CXCL2P19875 107 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 PTNP21246 168 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 THBS2P35442 1172 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ARFIP1P53367 373 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 STXBP1P61764 594 aaKnown RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 RPS7P62081 194 aaKnown RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 PRR5P85299 388 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 RUNX2Q13950 521 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 B3GNTL1Q67FW5 361 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 SEZ6L2Q6UXD5 910 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 MRGPREQ86SM8 312 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 STX12Q86Y82 276 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 ELMOD3Q96FG2 381 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 RPS6KB2Q9UBS0 482 aa11.31□□□□□ -0.6
SHMT2-207ENST00000553837 MRPS2Q9Y399 296 aaKnown RBP11.31□□□□□ -0.6
SHMT2-207ENST00000553837 A6NCN8 305 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-207ENST00000553837 RNF13O43567 381 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 RGS11O94810 467 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 UBL3O95164 117 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 CDH11P55287 796 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 TAS2R41P59536 307 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 KIAA1024LP59773 190 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 SIM1P81133 766 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-207ENST00000553837 BDH1Q02338 343 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 TGM3Q08188 693 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 DYRK1AQ13627 763 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 DEFB134Q4QY38 66 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 PRRT3Q5FWE3 981 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 PDSS1Q5T2R2 415 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 FCRL6Q6DN72 434 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 FRRS1Q6ZNA5 592 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 TPRA1Q86W33 373 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 KLBQ86Z14 1044 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 PATE1Q8WXA2 126 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 CDS1Q92903 461 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 GAL3ST3Q96A11 431 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 COL26A1Q96A83 441 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 MOAP1Q96BY2 351 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 FAM46AQ96IP4 442 aaKnown RBP11.3□□□□□ -0.6
SHMT2-207ENST00000553837 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
SHMT2-207ENST00000553837 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-207ENST00000553837 S1PR5Q9H228 398 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms