RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 PIGUQ9H490 435 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 C7orf69Q9H7B7 122 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 DUSP22Q9NRW4 184 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF275Q9NSD4 429 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-204ENST00000553605 REV1Q9UBZ9 1251 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 ZDHHC2Q9UIJ5 367 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
PRPF39-204ENST00000553605 POLR3HQ9Y535 204 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-204ENST00000553605 SPIN1Q9Y657 262 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-204ENST00000553605 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 OR6C65A6NJZ3 312 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 NR5A2O00482 541 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 PIP5K1BO14986 540 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 SYNGR3O43761 229 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 DNAJA2O60884 412 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 CYP7B1O75881 506 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 SUPT7LO94864 414 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 FSHBP01225 129 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TCN1P20061 433 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ASMTP46597 345 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TUBA1BP68363 451 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TUBA4AP68366 448 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ANKRD26P1Q6NSI1 321 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TUBA1AQ71U36 451 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 DOK3Q7L591 496 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ABHD12BQ7Z5M8 362 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 POMGNT2Q8NAT1 580 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 OR1K1Q8NGR3 316 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ZFP28Q8NHY6 868 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 CCT8L2Q96SF2 557 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF382Q96SR6 550 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ACER3Q9NUN7 267 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 PDP1Q9P0J1 537 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-204ENST00000553605 PPP2R2CQ9Y2T4 447 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
PRPF39-204ENST00000553605 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 A8MT66 165 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 M0R233 179 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 KRT33AO76009 404 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 LGI1O95970 557 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 IGKV3-15P01624 115 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 HMGN2P05204 90 aaKnown RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 APOBEC1P41238 236 aaKnown RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 CALCOCO2Q13137 446 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 BAMBIQ13145 260 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 REP15Q6BDI9 236 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 LEG1Q6P5S2 330 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 C1QL4Q86Z23 238 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 FAM169BQ8N8A8 192 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 FAM76AQ8TAV0 307 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 AURKBQ96GD4 344 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 EGLN2Q96KS0 407 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 MRPL57Q9BQC6 102 aaKnown RBP11.86□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF416Q9BWM5 594 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 LAT2Q9GZY6 243 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 CHRNA9Q9UGM1 479 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 OPN4Q9UHM6 478 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 CMAHPQ9Y471 501 aa11.86□□□□□ -0.51
PRPF39-204ENST00000553605 CCDC151A5D8V7 595 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 EIF1BO60739 113 aaKnown RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 CELA3BP08861 270 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 GATA3P23771 443 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 FKBP2P26885 142 aaKnown RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 EVX1P49640 407 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 CLK1P49759 484 aaKnown RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 SKP2Q13309 424 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 DAG1Q14118 895 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 LASP1Q14847 261 aaKnown RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 NOXRED1Q6NXP6 359 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 MYPOPQ86VE0 399 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 SLC35F6Q8N357 371 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 MAGEE2Q8TD90 523 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 TMEM45BQ96B21 275 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 KCNA7Q96RP8 456 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 GPA33Q99795 319 aa11.85□□□□□ -0.51
PRPF39-204ENST00000553605 NAA11Q9BSU3 229 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-204ENST00000553605 CCDC106Q9BWC9 280 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms