RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 DNAJA3Q96EY1 480 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 ADGRG7Q96K78 797 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 LURAP1Q96LR2 239 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 NPAS1Q99742 590 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 SH3GL1Q99961 368 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 TREX2Q9BQ50 279 aaPredicted RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 KLHDC3Q9BQ90 382 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 TACO1Q9BSH4 297 aaKnown RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 NAA11Q9BSU3 229 aaPredicted RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 MED18Q9BUE0 208 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 SPATA9Q9BWV2 254 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 TAPBPLQ9BX59 468 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 POLDIP3Q9BY77 421 aaKnown RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 NSRP1Q9H0G5 558 aaKnown RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 A4GALTQ9NPC4 353 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 CTPS2Q9NRF8 586 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 FGFR1OP2Q9NVK5 253 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF446Q9NWS9 450 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 GID8Q9NWU2 228 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 ELOVL5Q9NYP7 299 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF226Q9NYT6 803 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 CRIM1Q9NZV1 1036 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 CHRNA9Q9UGM1 479 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 PRDM4Q9UKN5 801 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 ANGPT4Q9Y264 503 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 TMED7Q9Y3B3 224 aa5.28□□□□□ -1.56
CCDC65-204ENST00000552188 FLNBO75369 2602 aaKnown RBP5.28□□□□□ -1.56
CCDC65-204ENST00000552188 PKDREJQ9NTG1 2253 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 NBPF19A0A087WUL8 3843 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 TMEM238LA0A1B0GVL6 79 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SH3D21A4FU49 640 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 A6NNC1 897 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 C16orf97H3BN30 126 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 MRASO14807 208 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 EFNA2O43921 213 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SS18L1O75177 396 aaPredicted RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 TNFSF13O75888 250 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 PGM3O95394 542 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 FESP07332 822 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 YES1P07947 543 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 ETS2P15036 469 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 IGFBP2P18065 325 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 GTF2E2P29084 291 aaKnown RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SHC1P29353 583 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 TACR3P29371 465 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 IDUAP35475 653 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SLC1A3P43003 542 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 DIO1P49895 249 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 MAP2K6P52564 334 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 MVDP53602 400 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SLC35A1P78382 337 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 FAM27E3Q08E93 113 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 EPS8Q12929 822 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 KLF10Q13118 480 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CTU2Q2VPK5 515 aaKnown RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SYT14P1Q58G82 188 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 INTS11Q5TA45 600 aaKnown RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 RNF220Q5VTB9 566 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 REEP3Q6NUK4 255 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 LINC00114Q6XXX2 140 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CPLX4Q7Z7G2 160 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CDH24Q86UP0 819 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SLC30A8Q8IWU4 369 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 TUSC5Q8IXB3 177 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 ZNF100Q8IYN0 542 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 UBE2J2Q8N2K1 259 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 C11orf65Q8NCR3 313 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 HIPK4Q8NE63 616 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 FAM71CQ8NEG0 241 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 BHLHE22Q8NFJ8 381 aaPredicted RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 ZC3HAV1LQ96H79 300 aaKnown RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 DACH2Q96NX9 599 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CGREF1Q99674 301 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 ECSITQ9BQ95 431 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 GPATCH1Q9BRR8 931 aaKnown RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SRXN1Q9BYN0 137 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CLEC4MQ9H2X3 399 aaPredicted RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 BCL2L10Q9HD36 194 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 PLSCR4Q9NRQ2 329 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 RLIMQ9NVW2 624 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SLC25A37Q9NYZ2 338 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 JKAMPQ9P055 326 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 EMC3Q9P0I2 261 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 FRRS1LQ9P0K9 344 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 VAPAQ9P0L0 249 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 C6orf203Q9P0P8 240 aaPredicted RBP5.27□□□□□ -1.57
CCDC65-204ENST00000552188 SLAMF8Q9P0V8 285 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 TMEM181Q9P2C4 612 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 KLHL14Q9P2G3 628 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 HDGFL3Q9Y3E1 203 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 CAPN7Q9Y6W3 813 aa5.27□□□□□ -1.57
CCDC65-204ENST00000552188 LOC100653049A0A140TA62 436 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 TMEM72A0PK05 275 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 CDHR4A6H8M9 788 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 BBIP1A8MTZ0 92 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 FAAHO00519 579 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 GPR171O14626 319 aa5.26□□□□□ -1.57
CCDC65-204ENST00000552188 ZNF208O43345 1280 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms