RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 EXD2Q9NVH0 621 aa12.96□□□□□ -0.33
TMEM106C-216ENST00000551305 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
TMEM106C-216ENST00000551305 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.33
TMEM106C-216ENST00000551305 WDR45Q9Y484 360 aa12.96□□□□□ -0.33
TMEM106C-216ENST00000551305 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
TMEM106C-216ENST00000551305 PLCE1Q9P212 2302 aa12.96□□□□□ -0.34
TMEM106C-216ENST00000551305 TMEM72A0PK05 275 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 KIAA0513O60268 411 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 CPSF4O95639 269 aaKnown RBP12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 C8BP07358 591 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 IMPDH2P12268 514 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 IDH2P48735 452 aaKnown RBP12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 PHC1P78364 1004 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 H3F3AP84243 136 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 CHRNB3Q05901 458 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 FRRS1Q6ZNA5 592 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 ANKRD46Q86W74 232 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 OR4A15Q8NGL6 344 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 C3orf49Q96BT1 292 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 ROPN1LQ96C74 230 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 FBXO17Q96EF6 278 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 PPP1R36Q96LQ0 422 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 FKRPQ9H9S5 495 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 PPCSQ9HAB8 311 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 TMEM181Q9P2C4 612 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 FLVCR1Q9Y5Y0 555 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
TMEM106C-216ENST00000551305 LOC100289279A0A1B0GTE1 492 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 PRAMEF27A3QJZ7 478 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 AP3D1O14617 1153 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 KLF11O14901 512 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ANKRD28O15084 1053 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CSF3P09919 207 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SRD5A1P18405 259 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CDH2P19022 906 aaPredicted RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 KCNJ10P78508 379 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 EMX2Q04743 252 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SWI5Q1ZZU3 235 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ARFGAP2Q8N6H7 521 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 MIPOL1Q8TD10 442 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 TCP10LQ8TDR4 215 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CNOT9Q92600 299 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 MSI2Q96DH6 328 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SORCS2Q96PQ0 1159 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 PRR14Q9BWN1 585 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 MKS1Q9NXB0 559 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 TRAPPC4Q9Y296 219 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 AMDHD2Q9Y303 409 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 HEATR1Q9H583 2144 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 MALRD1Q5VYJ5 2156 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 IGHV4-61A0A0C4DH41 118 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ZC3H12DA2A288 527 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 RNASET2O00584 256 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 DNPH1O43598 174 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SCN2BO60939 215 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 BMP4P12644 408 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 GZMKP49863 264 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 PDLIM4P50479 330 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SLC17A1Q14916 467 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CARTPTQ16568 116 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 HIKESHIQ53FT3 197 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ATAD3BQ5T9A4 648 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ANKS4BQ8N8V4 417 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 SAP130Q9H0E3 1048 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 OSGIN1Q9UJX0 560 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 KCNS2Q9ULS6 477 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
TMEM106C-216ENST00000551305 CREB1P16220 341 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 UQCRC2P22695 453 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 THBS2P35442 1172 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 NR4A2P43354 598 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 PRPS1P60891 318 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 SLC35A1P78382 337 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 GPAT3Q53EU6 434 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 FAM166AQ6J272 317 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 C17orf78Q8N4C9 275 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 ZIC4Q8N9L1 334 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 C1orf162Q8NEQ5 155 aaPredicted RBP12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 NAA11Q9BSU3 229 aaPredicted RBP12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 EXOSC3Q9NQT5 275 aaKnown RBP12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 POLE3Q9NRF9 147 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 PARPBPQ9NWS1 579 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 NOP53Q9NZM5 478 aaKnown RBP12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 SLC9A8Q9Y2E8 581 aa12.93□□□□□ -0.34
TMEM106C-216ENST00000551305 ITM2AO43736 263 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms