RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 OCLNQ16625 522 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 TIGD3Q6B0B8 471 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 TMEM154Q6P9G4 183 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 ISLR2Q6UXK2 745 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 PTCHD4Q6ZW05 846 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-229ENST00000551261 KIF18BQ86Y91 864 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 CCDC71Q8IV32 467 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-229ENST00000551261 LNX2Q8N448 690 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 FAM26EQ8N5C1 309 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 OR1J4Q8NGS1 313 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 FGF11Q92914 225 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 RFKQ969G6 155 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 TSSK6Q9BXA6 273 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 POTEKPQ9BYX7 375 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 NANSQ9NR45 359 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 CNOT2Q9NZN8 540 aaKnown RBP12.91□□□□□ -0.34
LETMD1-229ENST00000551261 LRFN1Q9P244 771 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 B4GALT7Q9UBV7 327 aa12.91□□□□□ -0.34
LETMD1-229ENST00000551261 MRPS18CQ9Y3D5 142 aaKnown RBP12.91□□□□□ -0.34
LETMD1-229ENST00000551261 CNOT1A5YKK6 2376 aaKnown RBP12.91□□□□□ -0.34
LETMD1-229ENST00000551261 TRIM64CA6NLI5 447 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 FZD7O75084 574 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 PTP4A3O75365 173 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 TRIM3O75382 744 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 CLPTM1O96005 669 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 IFNGP01579 166 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 HIST1H2ABP04908 130 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 GABRB1P18505 474 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 FUT1P19526 365 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 LSM11P83369 360 aaKnown RBP eCLIP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 OC90Q02509 493 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 MFAP5Q13361 173 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 TGIF1Q15583 401 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 CTU2Q2VPK5 515 aaKnown RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 PRAMEF20Q5VT98 475 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 HIST3H2AQ7L7L0 130 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 SLC46A3Q7Z3Q1 461 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 GTPBP8Q8N3Z3 284 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 SCAIQ8N9R8 606 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
LETMD1-229ENST00000551261 KCNE4Q8WWG9 221 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 HIST1H2ACQ93077 130 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 FAM173AQ9BQD7 235 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 DSN1Q9H410 356 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 EGLN3Q9H6Z9 239 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 MED11Q9P086 117 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 CPAMD8Q8IZJ3 1885 aa12.9□□□□□ -0.34
LETMD1-229ENST00000551261 PCSK5Q92824 1860 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 OR5H15A6NDH6 313 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 EFCAB10A6NFE3 127 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 GJE1A6NN92 205 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 BHLHE40O14503 412 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 IMPA2O14732 288 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 ARPC3O15145 178 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 MAN1A2O60476 641 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TSPAN19P0C672 248 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 ASAH2BP0C7U1 165 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 PEPDP12955 493 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 CNR1P21554 472 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
LETMD1-229ENST00000551261 SRD5A2P31213 254 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 NR1H2P55055 460 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 MVKQ03426 396 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 EGR4Q05215 589 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 FOXF1Q12946 379 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TMED1Q13445 227 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TUBA3CQ13748 450 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TOMM34Q15785 309 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-229ENST00000551261 SNAPC1Q16533 368 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 ARMC4Q5T2S8 1044 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 C1orf140Q5VVS0 124 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 B3GNTL1Q67FW5 361 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-229ENST00000551261 BICRALQ6AI39 1079 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 NANOGNBQ7Z5D8 188 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 SVOPQ8N4V2 548 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 WDSUB1Q8N9V3 476 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 OR8D4Q8NGM9 314 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 OR13C2Q8NGS9 318 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 MFSD8Q8NHS3 518 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 TMEM163Q8TC26 289 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 MYDGFQ969H8 173 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 ASPNQ9BXN1 380 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 PLA2G12AQ9BZM1 189 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
LETMD1-229ENST00000551261 CMC2Q9NRP2 79 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms