RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NDUFA9Q16795 377 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB41Q5JT25 222 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SIRPB2Q5JXA9 342 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ENTPD8Q5MY95 495 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CTSL3PQ5NE16 218 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 LY6G6FQ5SQ64 297 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 OR52W1Q6IF63 320 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PRR5LQ6MZQ0 368 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TAPT1Q6NXT6 567 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SFXN4Q6P4A7 337 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PRSS55Q6UWB4 352 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SPNS3Q6ZMD2 512 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF783Q6ZMS7 281 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PAQR9Q6ZVX9 377 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MILR1Q7Z6M3 343 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CIR1Q86X95 450 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RYBPQ8N488 228 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 HORMAD2Q8N7B1 307 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TCEANCQ8N8B7 351 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 NKAIN3Q8N8D7 197 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 AVL9Q8NBF6 648 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC30A7Q8NEW0 376 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2AK2Q8NG84 335 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 OR5R1Q8NH85 324 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PIGXQ8TBF5 258 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 IFI44Q8TCB0 444 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 HPSE2Q8WWQ2 592 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SCLYQ96I15 445 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF385AQ96PM9 386 aaKnown RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SERINC2Q96SA4 455 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TMED9Q9BVK6 235 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SCRT1Q9BWW7 348 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RSPO3Q9BXY4 272 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ACPTQ9BZG2 426 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CHIAQ9BZP6 476 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC39A8Q9C0K1 460 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MFFQ9GZY8 342 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SEC61A2Q9H9S3 476 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TPT1P8Q9HAU6 139 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 GPN1Q9HCN4 374 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF302Q9NR11 478 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 NRBP2Q9NSY0 501 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CUTCQ9NTM9 273 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 C2orf42Q9NWW7 574 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CACFD1Q9UGQ2 172 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TCEAL9Q9UHQ7 104 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 FBXL7Q9UJT9 491 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RASD1Q9Y272 281 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC35A3Q9Y2D2 325 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM96BQ9Y3D0 163 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MRPS18CQ9Y3D5 142 aaKnown RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 POMT1Q9Y6A1 747 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MICAL3Q7RTP6 2002 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PDCD11Q14690 1871 aaKnown RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ALPK3Q96L96 1907 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 TRIP11Q15643 1979 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 COL14A1Q05707 1796 aaKnown RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 A0A0A6YYC8 382 aaPredicted RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 TRBV4-1A0A0J9YWV2 114 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 C2orf92A0A1B0GVN3 265 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM72A0PK05 275 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 URADA6NGE7 173 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 ACOD1A6NK06 481 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF724A8MTY0 619 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 A8MWP6 167 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 F5H5P2 479 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 GABARAPH6UMI1 98 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 H7C0S8 307 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 I3L1I5 382 aaPredicted RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 SULT2B1O00204 365 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 DVL2O14641 736 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 ARPC1BO15143 372 aaKnown RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 RNF13O43567 381 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 BEST1O76090 585 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 AK1P00568 194 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 CD1AP06126 327 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 SFTPBP07988 381 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 RHOP08100 348 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 CD14P08571 375 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 FCGR3AP08637 254 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 PKMP14618 531 aaKnown RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 NQO2P16083 231 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 AMD1P17707 334 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 DRD5P21918 477 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 AKAP5P24588 427 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 LMO1P25800 156 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 AVPR2P30518 371 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 AGTR1P30556 359 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 TAF6P49848 677 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 GMFBP60983 142 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 MRPS10P82664 201 aaKnown RBP4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 CNTN1Q12860 1018 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 SKP2Q13309 424 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 NAE1Q13564 534 aa4.87□□□□□ -1.63
LSM3P2-201ENST00000551246 COTL1Q14019 142 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms