RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LINC00615Q96LM1 132 aaPredicted RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 KLK8O60259 260 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TACR3P29371 465 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 MRPL2Q5T653 305 aaKnown RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 OR51L1Q8NGJ5 315 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TSLPQ969D9 159 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TM4SF18Q96CE8 201 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SAMD8Q96LT4 415 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF385DQ9H6B1 395 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 UCKL1Q9NWZ5 548 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 ADAM18Q9Y3Q7 739 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TRIM64A6NGJ6 449 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SUSD5O60279 629 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 CDRT1O95170 752 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 ADAP00813 363 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SELENOWP63302 87 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 ATAD3CQ5T2N8 411 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 NIPAL3Q6P499 406 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 CCBE1Q6UXH8 406 aaPredicted RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SFTPA1Q8IWL2 248 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SGCZQ96LD1 299 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TRIP12Q14669 1992 aaPredicted RBP11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TTC3P53804 2025 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 DLGAP1O14490 977 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PTTG1O95997 202 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 STSP08842 583 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF16P17020 682 aaPredicted RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ERP29P30040 261 aaKnown RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 KIR2DL1P43626 348 aaPredicted RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 SCRN3Q0VDG4 424 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 BCL2L15Q5TBC7 163 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CPZQ66K79 652 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 C5orf46Q6UWT4 87 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TOMM5Q8N4H5 51 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 C14orf119Q9NWQ9 140 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CNIH4Q9P003 139 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 GFYI3L273 518 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CSN2P05814 226 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TACR1P25103 407 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 GNG2P59768 71 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF750Q32MQ0 723 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 VASH2Q86V25 355 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 SPAG16Q8N0X2 631 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ARMC10Q8N2F6 343 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 BPIFA2Q96DR5 249 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CCDC115Q96NT0 180 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PPT2Q9UMR5 302 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 FAM171A2A8MVW0 826 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PPM1DO15297 605 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TAPBPO15533 448 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 KIAA0513O60268 411 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 UPK1BO75841 260 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CLDN17P56750 224 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CREB3L1Q96BA8 519 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF583Q96ND8 569 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 OBP2BQ9NPH6 170 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 P4HTMQ9NXG6 502 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 NDRG3Q9UGV2 375 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PDGFBP01127 241 aaPredicted RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TRHRP34981 398 aaPredicted RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 HERV-K104P61576 105 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 CD83Q01151 205 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PLBD1Q6P4A8 553 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 B3GNT8Q7Z7M8 397 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 KLHDC8BQ8IXV7 354 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ELP5Q8TE02 316 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 LRR1Q96L50 414 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 FEVQ99581 238 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 C12orf49Q9H741 205 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 TESQ9UGI8 421 aaKnown RBP11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF639Q9UID6 485 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 ATG2BQ96BY7 2078 aa11.3□□□□□ -0.6
NR4A1-215ENST00000550557 OR6C70A6NIJ9 312 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 SEC14L2O76054 403 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 UCNP55089 124 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 ERVK-25P63136 954 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 ADARB1P78563 741 aaKnown RBP11.29□□□□□ -0.6
NR4A1-215ENST00000550557 ACBD7Q8N6N7 88 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 CYB561A3Q8NBI2 242 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
NR4A1-215ENST00000550557 URM1Q9BTM9 101 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms