RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FUT5Q11128 374 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 FAPQ12884 760 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 GNA13Q14344 377 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 DPY19L1Q2PZI1 675 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 COX20Q5RI15 118 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 NCMAPQ5T1S8 102 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 OGFOD2Q6N063 350 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 Q6ZT83 130 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 GRINAQ7Z429 371 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CCDC103Q8IW40 242 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 LRRC34Q8IZ02 419 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF417Q8TAU3 575 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 PIWIL2Q8TC59 973 aaKnown RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SMAP2Q8WU79 429 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SLC25A43Q8WUT9 341 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 MUCL1Q96DR8 90 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ZHX1-C8orf76Q96EF9 292 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ARL5BQ96KC2 179 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 TRNT1Q96Q11 434 aaKnown RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF587Q96SQ5 575 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CCDC106Q9BWC9 280 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 MANSC1Q9H8J5 431 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 NKIRAS1Q9NYS0 192 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CHRNA9Q9UGM1 479 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 LIPT1Q9Y234 373 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 NOSIPQ9Y314 301 aaKnown RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 TMED7Q9Y3B3 224 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 GPR45Q9Y5Y3 372 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SPIN1Q9Y657 262 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ABCA4P78363 2273 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ARHGAP21Q5T5U3 1957 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 EXPH5Q8NEV8 1989 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ACANP16112 2415 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 MPDZO75970 2070 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 A0A1W2PR80 420 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 AGAP5A6NIR3 686 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 SLCO1B7G3V0H7 640 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 RFXANKO14593 260 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 RAMP1O60894 148 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 MRPL33O75394 65 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 RAD51DO75771 328 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ANP32DO95626 131 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 KRT75O95678 551 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PMS2P2O95744 297 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 IL6P05231 212 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 HEXAP06865 529 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 DBIP07108 87 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 SOD3P08294 240 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ETFAP13804 333 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 GGT1P19440 569 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PTNP21246 168 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 IGHV1-2P23083 117 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 FKBP2P26885 142 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PCSK6P29122 969 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 TACR3P29371 465 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 NTF4P34130 210 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 CDKN1AP38936 164 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 CRATP43155 626 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 HTR3AP46098 478 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ANXA11P50995 505 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PSMA6P60900 246 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 MAGOHP61326 146 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 RPS4XP62701 263 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PLAURQ03405 335 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 TNK1Q13470 666 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PPA1Q15181 289 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF672Q499Z4 452 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 SLC9B1Q4ZJI4 515 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 C9orf135Q5VTT2 229 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 FBXW9Q5XUX1 488 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 AP1ARQ63HQ0 302 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ATG16L1Q676U5 607 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ADAM5Q6NVV9 412 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 DNAJC14Q6Y2X3 702 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 LRRC74BQ6ZQY2 392 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 PEX5LQ8IYB4 626 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF433Q8N7K0 673 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 KBTBD8Q8NFY9 601 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 OIT3Q8WWZ8 545 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 IGFBPL1Q8WX77 278 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 FBXW5Q969U6 566 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 APH1AQ96BI3 265 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 TRMT61AQ96FX7 289 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 COX4I2Q96KJ9 171 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 NAA11Q9BSU3 229 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 C1QTNF6Q9BXI9 259 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 POTEKPQ9BYX7 375 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 SLC38A1Q9H2H9 487 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 BRD7Q9NPI1 651 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 EXOSC3Q9NQT5 275 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF701Q9NV72 531 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 RLIMQ9NVW2 624 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 CISD1Q9NZ45 108 aaKnown RBP5.92□□□□□ -1.46
SCAF11-211ENST00000547950 EMC3Q9P0I2 261 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 TMEM181Q9P2C4 612 aa5.92□□□□□ -1.46
SCAF11-211ENST00000547950 OSGIN1Q9UJX0 560 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms