RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RAB13P51153 203 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-212ENST00000546744 RAB6CQ53S08 254 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 NLRC3Q7RTR2 1065 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 CMIPQ8IY22 773 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 NKAIN3Q8N8D7 197 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 DPH7Q9BTV6 452 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 RAB6CQ9H0N0 254 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ACOXLQ9NUZ1 547 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ICKQ9UPZ9 632 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 SMLR1H3BR10 107 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 ELAVL4P26378 380 aaKnown RBP11.96□□□□□ -0.5
PTCH1-212ENST00000546744 C18orf63Q68DL7 685 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 GHSRQ92847 366 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 BORCS8Q96FH0 119 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 FAM83CQ9BQN1 747 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-212ENST00000546744 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 C8orf33Q9H7E9 229 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-212ENST00000546744 TLR9Q9NR96 1032 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.5
PTCH1-212ENST00000546744 H7C1Q1 480 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HCRTO43612 131 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 PAPLNO95428 1278 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SNRPBP14678 240 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 KCNJ5P48544 419 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 CLRN1P58418 232 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HBA1P69905 142 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 PDE7AQ13946 482 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 RSU1Q15404 277 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 MPEG1Q2M385 716 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ZMAT1Q5H9K5 638 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 MBOAT2Q6ZWT7 520 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ARRDC2Q8TBH0 407 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 LINC01599Q8WXQ3 324 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 NEURL3Q96EH8 262 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 MCOLN1Q9GZU1 580 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SLAMF7Q9NQ25 335 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 CPNE7Q9UBL6 633 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 TBPP20226 339 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HOXC12P31275 282 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 AKR1C2P52895 323 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 H3F3AP84243 136 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 FPGSQ05932 587 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ZSCAN4Q8NAM6 433 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HERVK_113Q902F9 699 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 TANKQ92844 425 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 WDR83Q9BRX9 315 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ACKR4Q9NPB9 350 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 PRTFDC1Q9NRG1 225 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 TAS2R5Q9NYW4 299 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF225Q9UK10 706 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 POLR2AP24928 1970 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HSPB2A8KAH6 182 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 KHNYNO15037 678 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 CNMDO75829 334 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 RANP62826 216 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HSPB2Q16082 182 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 FAM182AQ5T1J6 154 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 C17orf107Q6ZR85 190 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 DPPA2Q7Z7J5 298 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 PIANPQ8IYJ0 282 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 STPG2Q8N412 459 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SEMA6DQ8NFY4 1073 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 OR10R2Q8NGX6 335 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 PHYHIPLQ96FC7 376 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ELF4Q99607 663 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 CSNK1G1Q9HCP0 422 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 GLOD5A6NK44 160 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 HMGN2P05204 90 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SMIM6P0DI80 62 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 FUT1P19526 365 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SHC1P29353 583 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 XCR1P46094 333 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 RPP30P78346 268 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 MEF2AQ02078 507 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ISG20Q96AZ6 181 aaKnown RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF385DQ9H6B1 395 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ABI3Q9P2A4 366 aa11.95□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF223Q9UK11 482 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-212ENST00000546744 SIPA1L1O43166 1804 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 TRBV4-1A0A0J9YWV2 114 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 GBX1Q14549 363 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 BATFQ16520 125 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 ADAM5Q6NVV9 412 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 MFSD6LQ8IWD5 586 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 KREMEN2Q8NCW0 462 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 OR56B1Q8NGI3 324 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms