RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CFAP73A6NFT4 308 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 M0QX08 132 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 M0R3H8 397 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 AP3D1O14617 1153 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 FRS3O43559 492 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TPST1O60507 370 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 HCN1O60741 890 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TRAPPC6AO75865 159 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 DNAJC8O75937 253 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ATP5HO75947 161 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF682O95780 498 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 EPPINO95925 133 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SERPINA1P01009 418 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 IFNA14P01570 189 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 IGHG3P01860 377 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 LINGO3P0C6S8 592 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 NCK1P16333 377 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 HK1P19367 917 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 PGCP20142 388 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ATP6V1B2P21281 511 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ELK4P28324 431 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 HOXC12P31275 282 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 KDELR2P33947 212 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 RYKP34925 604 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 GCKP35557 465 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SLC6A8P48029 635 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 RASSF2P50749 326 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 RGS8P57771 180 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 HSF1Q00613 529 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 EPS8Q12929 822 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 QPRTQ15274 297 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TESK1Q15569 626 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 GLIPR1L2Q4G1C9 344 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 CYBRD1Q53TN4 286 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ARHGAP11AQ6P4F7 1023 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TRILQ7L0X0 811 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 YRDCQ86U90 279 aaKnown RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ULK2Q8IYT8 1036 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 CLIP4Q8N3C7 705 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 GTPBP8Q8N3Z3 284 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 GPR32P1Q8NGA4 272 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 NEIL3Q8TAT5 605 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SLC26A7Q8TE54 656 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ST8SIA1Q92185 356 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 PROX1Q92786 737 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SLC35B4Q969S0 331 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 PPP1R14AQ96A00 147 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 FAM162AQ96A26 154 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 MCUR1Q96AQ8 359 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ZBTB8AQ96BR9 441 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ASB9Q96DX5 294 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 CLPTM1LQ96KA5 538 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SFXN2Q96NB2 322 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ARHGDIGQ99819 225 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 BTBD10Q9BSF8 475 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 THTPAQ9BU02 230 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 RSPO3Q9BXY4 272 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 MUC13Q9H3R2 512 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 LDAHQ9H6V9 325 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 EXO5Q9H790 373 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ACKR4Q9NPB9 350 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 KLHL28Q9NXS3 571 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SPRR3Q9UBC9 169 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TESQ9UGI8 421 aaKnown RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 SLC9A8Q9Y2E8 581 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 RPH3AQ9Y2J0 694 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-211ENST00000546304 MYO7BQ6PIF6 2116 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 MED12LQ86YW9 2145 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 OR2M5A3KFT3 312 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 FAAHO00519 579 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 AQP7O14520 342 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 PEX14O75381 377 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GMNNO75496 209 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 NTN1O95631 604 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 FESP07332 822 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 C8BP07358 591 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GKN3PP0CG01 181 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 PRG2P13727 222 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 POU3F2P20265 443 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ME2P23368 584 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 HTR2AP28223 471 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 EIF1P41567 113 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 KCNJ5P48544 419 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF136P52737 540 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GFRA1P56159 465 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 B3GALT5-AS1P59052 145 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 RBPJQ06330 500 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 CRYZQ08257 329 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 SLC10A1Q14973 349 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 TOMM34Q15785 309 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 NRF1Q16656 503 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 DUSP7Q16829 419 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM44Q2T9K0 475 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 KRTCAP3Q53RY4 240 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 DCST1Q5T197 706 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 LCN8Q6JVE9 175 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 C3orf33Q6P1S2 294 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 AAGABQ6PD74 315 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GFRALQ6UXV0 394 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms