RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 TRAPPC4Q9Y296 219 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 NTNG1Q9Y2I2 539 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 HRH3Q9Y5N1 445 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ORC6Q9Y5N6 252 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 CORINQ9Y5Q5 1042 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 U3KQV3 271 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 KIAA1549Q9HCM3 1950 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 A0A1B0GVC2 190 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 TRAPPC6AO75865 159 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 AHSA1O95433 338 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PEPDP12955 493 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 CBLP22681 906 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 MAGEA5P43359 124 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 RAD23AP54725 363 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 B3GALT5-AS1P59052 145 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ALDH6A1Q02252 535 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 DAG1Q14118 895 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 TOMM20Q15388 145 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 KRTCAP3Q53RY4 240 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PDSS1Q5T2R2 415 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 FAM69AQ5T7M9 428 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ESPNLQ6ZVH7 1005 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 STK32CQ86UX6 486 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 CLDN22Q8N7P3 220 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 TEX19Q8NA77 164 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 RNF217Q8TC41 542 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 TMEM255BQ8WV15 326 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 FKRPQ9H9S5 495 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PDP1Q9P0J1 537 aaPredicted RBP14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 KIF17Q9P2E2 1029 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 NKX1-2Q9UD57 310 aaPredicted RBP14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 POFUT2Q9Y2G5 429 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 IGKV1D-42A0A075B6H8 117 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 OR14I1A6ND48 311 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 TSPAN31Q12999 210 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 C1orf140Q5VVS0 124 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 FAM180AQ6UWF9 173 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 WDR88Q6ZMY6 472 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 EPHX4Q8IUS5 362 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 SIAH3Q8IW03 269 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 NRMQ8IXM6 262 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 SCAIQ8N9R8 606 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 ATG16L2Q8NAA4 619 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 MFSD8Q8NHS3 518 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 NEIL3Q8TAT5 605 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 GNPDA2Q8TDQ7 276 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 BPIFA2Q96DR5 249 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 CIB1Q99828 191 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 MFRPQ9BY79 579 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 ZNF229Q9UJW7 825 aa14.46□□□□□ -0.1
PRPF40A-212ENST00000545856 TRGV5A0A0B4J1U4 118 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 TMEM72A0PK05 275 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 SAC3D1A6NKF1 404 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 FAM166BA8MTA8 275 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 AQP7O14520 342 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 KLF4O43474 513 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 GMFGO60234 142 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 PMS2P2O95744 297 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 ALPLP05186 524 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 IDUAP35475 653 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 VHLP40337 213 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 OMPP47874 163 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 GSSP48637 474 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 PTDSS1P48651 473 aaKnown RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 HSPA13P48723 471 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 NUP107P57740 925 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 CSNK2A1P68400 391 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 EGR4Q05215 589 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 CRYZQ08257 329 aaKnown RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 SF3B4Q15427 424 aaKnown RBP eCLIP14.45□□□□□ -0.12e-14■■■■■ 48
PRPF40A-212ENST00000545856 SEC23BQ15437 767 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 PLEKHN1Q494U1 663 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 FBXW10Q5XX13 1052 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 KDM4DQ6B0I6 523 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 PGBD2Q6P3X8 592 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 TRILQ7L0X0 811 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 YRDCQ86U90 279 aaKnown RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 ADPRHL1Q8NDY3 354 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 MIB2Q96AX9 1013 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 SGTBQ96EQ0 304 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 KLHL15Q96M94 604 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 FEVQ99581 238 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 KLHDC3Q9BQ90 382 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 MEPEQ9NQ76 525 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 TIGARQ9NQ88 270 aa14.45□□□□□ -0.1
PRPF40A-212ENST00000545856 ENO4A6NNW6 628 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 K7EM74 188 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 EIF1BO60739 113 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 IFI30P13284 250 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 POU3F2P20265 443 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 PEX2P28328 305 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 IST1P53990 364 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 ZNF74Q16587 644 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 ZNF239Q16600 458 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 CMPK2Q5EBM0 449 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 WIPI1Q5MNZ9 446 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 VASNQ6EMK4 673 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 ARHGAP11AQ6P4F7 1023 aa14.44□□□□□ -0.1
PRPF40A-212ENST00000545856 MAMDC2Q7Z304 686 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms