RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 AARDQ4LEZ3 155 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 DCST2Q5T1A1 773 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 OR5M10Q6IEU7 315 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF589Q86UQ0 364 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 PPP1R27Q86WC6 154 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ARIH2OSQ8N7S6 290 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ITFG1Q8TB96 612 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 TSPAN18Q96SJ8 248 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 TMEM175Q9BSA9 504 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 MRPL9Q9BYD2 267 aaKnown RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 GRPEL1Q9HAV7 217 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 HEBP1Q9NRV9 189 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 PNO1Q9NRX1 252 aaKnown RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 DCAF13Q9NV06 445 aaKnown RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 EHFQ9NZC4 300 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 AKAP7Q9P0M2 348 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ISY1Q9ULR0 285 aaKnown RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 L3MBTL1Q9Y468 752 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 SCN2AQ99250 2005 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 MIA3Q5JRA6 1907 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 COL4A2P08572 1712 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 NFASCO94856 1347 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ATG2BQ96BY7 2078 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 COL1A2P08123 1366 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 SPAG17Q6Q759 2223 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF320A2RRD8 509 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 E9PLD3 99 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 H0Y626 953 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 M0QZ92 97 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ATP6V1G1O75348 118 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 TOXO94900 526 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 TRIM16O95361 564 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 PRB1P04280 392 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 STSP08842 583 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 NSFP46459 744 aaKnown RBP2.67□□□□□ -1.98
SNHG1-224ENST00000545688 NOP14P78316 857 aaKnown RBP2.67□□□□□ -1.98
SNHG1-224ENST00000545688 NTHL1P78549 312 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 CYP51A1Q16850 503 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 PNCKQ6P2M8 343 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 GET4Q7L5D6 327 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-224ENST00000545688 BNIPLQ7Z465 357 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 TICAM2Q86XR7 235 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF100Q8IYN0 542 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ALLCQ8N6M5 410 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ANKRD49Q8WVL7 239 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 BCL2L2Q92843 193 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-224ENST00000545688 TCEAL3Q969E4 200 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 PSMG2Q969U7 264 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 FGGYQ96C11 551 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 HAVCR1Q96D42 359 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 VPS39Q96JC1 886 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 EDEM2Q9BV94 578 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 FAM114A2Q9NRY5 505 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 TRPC4Q9UBN4 977 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 LCMT1Q9UIC8 334 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF223Q9UK11 482 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-224ENST00000545688 ZFHX3Q15911 3703 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 DOPEY1Q5JWR5 2465 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 AHCTF1Q8WYP5 2266 aa2.67□□□□□ -1.98
SNHG1-224ENST00000545688 NID2Q14112 1375 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 CREBBPQ92793 2442 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 MYBPHLA2RUH7 354 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 J3QKU1 62 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 SUPT7LO94864 414 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 CCNE2O96020 404 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 IGFBP1P08833 259 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-224ENST00000545688 HNRNPA2B1P22626 353 aaKnown RBP2.66□□□□□ -1.98
SNHG1-224ENST00000545688 HTR1FP30939 366 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 PITPNBP48739 271 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 NME5P56597 212 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 PFN3P60673 137 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 SP4Q02446 784 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 ITGB3BPQ13352 177 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-224ENST00000545688 KCNJ11Q14654 390 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 Q6ZS52 159 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 FAM9BQ8IZU0 186 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 MARCH1Q8TCQ1 289 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 FAM3CQ92520 227 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 MSANTD3Q96H12 275 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 NRTNQ99748 197 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 ADPGKQ9BRR6 497 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 CARD6Q9BX69 1037 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 NXF3Q9H4D5 531 aaKnown RBP2.66□□□□□ -1.98
SNHG1-224ENST00000545688 PRORYQ9H606 182 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 LY9Q9HBG7 655 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 VAT1LQ9HCJ6 419 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 PIGVQ9NUD9 493 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 FBXW2Q9UKT8 454 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 NAP1L2Q9ULW6 460 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-224ENST00000545688 SNX5Q9Y5X3 404 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 BOD1L1Q8NFC6 3051 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 LRRK2Q5S007 2527 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 MYH7P12883 1935 aa2.66□□□□□ -1.98
SNHG1-224ENST00000545688 H3BMH7 237 aa2.65□□□□□ -1.99
SNHG1-224ENST00000545688 ADAM12O43184 909 aa2.65□□□□□ -1.99
SNHG1-224ENST00000545688 BUB1O43683 1085 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms