RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 EIF1BO60739 113 aaKnown RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 CRYAAP02489 173 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 BCKDHAP12694 445 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 DDX5P17844 614 aaKnown RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 EFNA1P20827 205 aaPredicted RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 HGFACQ04756 655 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 TRIP10Q15642 601 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 C9orf135Q5VTT2 229 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 CASP12Q6UXS9 341 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 ZYG11AQ6WRX3 759 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 GRINAQ7Z429 371 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 SPATA19Q7Z5L4 167 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 NATD1Q8N6N6 113 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 CCNYL1Q8N7R7 359 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 POMGNT2Q8NAT1 580 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 OR4F15Q8NGB8 312 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 SFXN5Q8TD22 340 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 ZNF317Q96PQ6 595 aaPredicted RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 SNX18Q96RF0 628 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 ZNF350Q9GZX5 532 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 TUBB1Q9H4B7 451 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 TMEM181Q9P2C4 612 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 FAF1Q9UNN5 650 aaPredicted RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 PTGDR2Q9Y5Y4 395 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 AK1P00568 194 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 CSTAP01040 98 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 IGKV3-15P01624 115 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 TFPIP10646 304 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 LAMP1P11279 417 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 NEFHP12036 1026 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 CCR4P51679 360 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 ACTG1P63261 375 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 PLAURQ03405 335 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 HIKESHIQ53FT3 197 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 RINLQ6ZS11 566 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 EIF3MQ7L2H7 374 aaKnown RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 PEG10Q86TG7 708 aaKnown RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 TMCO5AQ8N6Q1 288 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 UBASH3BQ8TF42 649 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 ZNF418Q8TF45 676 aaPredicted RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 WDR60Q8WVS4 1066 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 BCL2L2Q92843 193 aaPredicted RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 MOAP1Q96BY2 351 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 SF3B5Q9BWJ5 86 aaKnown RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 MOV10Q9HCE1 1003 aaKnown RBP12.75□□□□□ -0.37
RTN3-214ENST00000545432 PCDHB10Q9UN67 800 aa12.75□□□□□ -0.37
RTN3-214ENST00000545432 A0A087WUV0 522 aaPredicted RBP12.74□□□□□ -0.37
RTN3-214ENST00000545432 DUXAA6NLW8 204 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 TRIM77I1YAP6 450 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 KLF11O14901 512 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 SCAMP2O15127 329 aaKnown RBP12.74□□□□□ -0.37
RTN3-214ENST00000545432 TMPRSS2O15393 492 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 ZNF208O43345 1280 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 BCAS1O75363 584 aaPredicted RBP12.74□□□□□ -0.37
RTN3-214ENST00000545432 STX11O75558 287 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 UBTFL6P0CB48 400 aaPredicted RBP12.74□□□□□ -0.37
RTN3-214ENST00000545432 IMPDH2P12268 514 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 CALCRP30988 508 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 LIMS1P48059 325 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 MAP2K6P52564 334 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 MAPK14Q16539 360 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 PAQR6Q6TCH4 344 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 HOMEZQ8IX15 550 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 CLHC1Q8NHS4 586 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 MZB1Q8WU39 189 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 PMM1Q92871 262 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 TMEM186Q96B77 213 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 CHMP6Q96FZ7 201 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 OR11A1Q9GZK7 315 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 SERHL2Q9H4I8 314 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
RTN3-214ENST00000545432 DCDC2Q9UHG0 476 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 PCDHGB4Q9UN71 923 aa12.74□□□□□ -0.37
RTN3-214ENST00000545432 CECR9P0C854 216 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 IFNGR1P15260 489 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 ECHS1P30084 290 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 OR2B6P58173 313 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 ETF1P62495 437 aaKnown RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 SLC35A1P78382 337 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 GPR68Q15743 365 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 TUSC1Q2TAM9 212 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 AWAT1Q58HT5 328 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 CLEC6AQ6EIG7 209 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 EMBQ6PCB8 327 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 KLHL24Q6TFL4 600 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms