RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRBV7-9A0A0J9YWB2 115 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 C11orf98E9PRG8 122 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 SRPX2O60687 465 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 RAMP1O60894 148 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 CA1P00915 261 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 MMP1P03956 469 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 HSD17B1P14061 328 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 H2AFXP16104 143 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 PGCP20142 388 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 UGT1A4P22310 534 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 PPP2R1BP30154 601 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 RIDAP52758 137 aaKnown RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 CRIP2P52943 208 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 DYNLL1P63167 89 aaKnown RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 DEFB103AP81534 67 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 RGS1Q08116 209 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 ANGPT1Q15389 498 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 FILIP1LQ4L180 1135 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 FAM120AOSQ5T036 256 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM225Q6GV28 225 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 FAM71F2Q6NXP2 309 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 KCNIP4Q6PIL6 250 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 C16orf62Q7Z3J2 963 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 ACOT1Q86TX2 421 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 RNF130Q86XS8 419 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 SLC22A9Q8IVM8 553 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 LRRC75A-AS1Q8N1F1 130 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 CLDN19Q8N6F1 224 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 OR4D5Q8NGN0 318 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 HCAR2Q8TDS4 363 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 C12orf66Q96MD2 445 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 TCEANC2Q96MN5 208 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 NPY6RQ99463 290 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 SLC6A7Q99884 636 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 ANP32EQ9BTT0 268 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 SP140LQ9H930 580 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 GALPQ9UBC7 116 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 BARX2Q9UMQ3 279 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-222ENST00000545308 GMPPBQ9Y5P6 360 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 AUP1Q9Y679 476 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 CHD6Q8TD26 2715 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 ANKRD11Q6UB99 2663 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MIA3Q5JRA6 1907 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 LOXHD1Q8IVV2 1947 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ASTN1O14525 1302 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 IGHV3-16A0A0C4DH30 117 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 FOXE1O00358 373 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 OR7A17O14581 309 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 EDIL3O43854 480 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ECI2O75521 394 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 POP4O95707 220 aaKnown RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 SERPINA3P01011 423 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 CGAP01215 116 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 HBQ1P09105 142 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 BCKDHAP12694 445 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 LMO2P25791 158 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 SPRP35270 261 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ETV5P41161 510 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MAGEA9P43362 315 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 CASP4P49662 377 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 EMDP50402 254 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ACTR3P61158 418 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 CD300CQ08708 224 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MXD4Q14582 209 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 C14orf28Q4W4Y0 310 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 PHYHD1Q5SRE7 291 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 BPIFB2Q8N4F0 458 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ZSCAN4Q8NAM6 433 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 STXBP6Q8NFX7 210 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 OR5L2Q8NGL0 311 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 OR1F12Q8NHA8 337 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 RFESDQ8TAC1 157 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MIPOL1Q8TD10 442 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 POM121L2Q96KW2 1035 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 CCNL2Q96S94 520 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-222ENST00000545308 SYT11Q9BT88 431 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 BARHL1Q9BZE3 327 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 METTL7AQ9H8H3 244 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 ABCC13Q9NSE7 274 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 SIGLEC8Q9NYZ4 499 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 CTSZQ9UBR2 303 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 PCSK1NQ9UHG2 260 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MEMO1Q9Y316 297 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MYO15AQ9UKN7 3530 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 MYH7P12883 1935 aa3.27□□□□□ -1.89
SNHG1-222ENST00000545308 IGHV3OR16-12A0A075B7B8 117 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 A8MXK9 166 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF264O43296 627 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 FCMRO60667 390 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZG16O60844 167 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 TSC22D2O75157 780 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 NCK1P16333 377 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SDC1P18827 310 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms