RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 KCNS3Q9BQ31 491 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 LAT2Q9GZY6 243 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 REEP4Q9H6H4 257 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ZNF442Q9H7R0 627 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 MID1IP1Q9NPA3 183 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 G6PC2Q9NQR9 355 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 SERINC1Q9NRX5 453 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ACSS1Q9NUB1 689 aaPredicted RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 NINJ2Q9NZG7 142 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 SH3BP4Q9P0V3 963 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ARMCX1Q9P291 453 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 CRNNQ9UBG3 495 aaPredicted RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 SLC9A8Q9Y2E8 581 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 PTGDR2Q9Y5Y4 395 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 CCDC151A5D8V7 595 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 DNPH1O43598 174 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SEC22BO75396 215 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SKAP2O75563 359 aaPredicted RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 LGI1O95970 557 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 PNPP00491 289 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 IGLV1-44P01699 117 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ERCC1P07992 297 aaPredicted RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 INHBAP08476 426 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ADRA2AP08913 450 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 UBTFL6P0CB48 400 aaPredicted RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 SAGP10523 405 aaPredicted RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 IMPDH2P12268 514 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ADRA2CP18825 462 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SDC1P18827 310 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 TAC1P20366 129 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 NPR2P20594 1047 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 COL8A2P25067 703 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ZFP36P26651 326 aaKnown RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 PAFAH1B1P43034 410 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 GPR6P46095 362 aaPredicted RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 PRKAA2P54646 552 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 OR2B6P58173 313 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 LMO4P61968 165 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 CAV1Q03135 178 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 C2orf54Q08AI8 447 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 FOXL1Q12952 345 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SLC17A1Q14916 467 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 MSMPQ1L6U9 139 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ATP6AP1LQ52LC2 224 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 C1QTNF12Q5T7M4 302 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 C1QL2Q7Z5L3 287 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 NUP37Q8NFH4 326 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 OR4F15Q8NGB8 312 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 OR1K1Q8NGR3 316 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 OR51F2Q8NH61 342 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ADAMTS15Q8TE58 950 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 CKAP2Q8WWK9 683 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 L3HYPDHQ96EM0 354 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 FCRL1Q96LA6 429 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ZNF385AQ96PM9 386 aaKnown RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 TSSK3Q96PN8 268 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SDF2Q99470 211 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 PAFAH2Q99487 392 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 SUCNR1Q9BXA5 334 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 C1QTNF5Q9BXJ0 243 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ACTRT3Q9BYD9 372 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 IQCGQ9H095 443 aaKnown RBP8.1□□□□□ -1.11
CHD4-212ENST00000545083 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 DYNLRB1Q9NP97 96 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 GPATCH2Q9NW75 528 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 CHRNA9Q9UGM1 479 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 BAIAP2L1Q9UHR4 511 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 HDGFL3Q9Y3E1 203 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 PPIAL4AQ9Y536 164 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 WNK2Q9Y3S1 2297 aa8.1□□□□□ -1.11
CHD4-212ENST00000545083 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 FCMRO60667 390 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 CSTAP01040 98 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 TFP02787 698 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 HPXP02790 462 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 CCNA2P20248 432 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 ATP5F1P24539 256 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 APOBEC1P41238 236 aaKnown RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 PLAURQ03405 335 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 TP53BP2Q13625 1128 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 ZNF141Q15928 474 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 LINGO2Q7L985 606 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 ADGRG3Q86Y34 549 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 SPATA4Q8NEY3 305 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 OR5D16Q8NGK9 328 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 OR2T11Q8NH01 316 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 DCAKDQ8WVC6 231 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 TMEM234Q8WY98 164 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 C22orf15Q8WYQ4 148 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 YIPF5Q969M3 257 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 TMEM45BQ96B21 275 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 AURKBQ96GD4 344 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 UNKLQ9H9P5 680 aaKnown RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 OBP2BQ9NPH6 170 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 RRAGDQ9NQL2 400 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 TMEM45AQ9NWC5 275 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 PARPBPQ9NWS1 579 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms