RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 COQ9O75208 318 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 EEDO75530 441 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ERAL1O75616 437 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SEMA3DO95025 777 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 NTN1O95631 604 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ANGPTL1O95841 491 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MBD3O95983 291 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MT-ND5P03915 603 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ANXA2P07355 339 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SAGP10523 405 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PGAM1P18669 254 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ADRA2CP18825 462 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 BSGP35613 385 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 EIF1P41567 113 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SLC1A3P43003 542 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MAGEA6P43360 314 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 GPR6P46095 362 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 HSPA7P48741 367 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 VPS41P49754 854 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 GPX6P59796 221 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 IL1RL1Q01638 556 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TGFBR3Q03167 851 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PIGFQ07326 219 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PMS2P11Q13670 270 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 DDX39BQ13838 428 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 CRYMQ14894 314 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TSNQ15631 228 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TRIP10Q15642 601 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ZNHIT3Q15649 155 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 DECR1Q16698 335 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TRMT12Q53H54 448 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SPANXN3Q5MJ09 141 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 LIPJQ5W064 366 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 FBXW9Q5XUX1 488 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 REP15Q6BDI9 236 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SLC48A1Q6P1K1 146 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL24Q6TFL4 600 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 IKBIPQ70UQ0 350 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SPATA19Q7Z5L4 167 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 GALNT5Q7Z7M9 940 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MISPQ8IVT2 679 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SLC44A2Q8IWA5 706 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 SAMD14Q8IZD0 417 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 UBE2J2Q8N2K1 259 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF433Q8N7K0 673 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 VPS37AQ8NEZ2 397 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 OR56A1Q8NGH5 318 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 POC1BQ8TC44 478 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF675Q8TD23 568 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ACTRT2Q8TDY3 377 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TRPC4APQ8TEL6 797 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MAIP1Q8WWC4 291 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 EFHD2Q96C19 240 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL29Q96CT2 875 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 RNF145Q96MT1 663 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 VSTM2LQ96N03 204 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MUS81Q96NY9 551 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 BBS4Q96RK4 519 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 NAP1L3Q99457 506 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MTERF1Q99551 399 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF717Q9BY31 904 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 WDR12Q9GZL7 423 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 DERL2Q9GZP9 239 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 VPS11Q9H270 941 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PLK3Q9H4B4 646 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 FN3KRPQ9HA64 309 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 POPDC3Q9HBV1 291 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 LPAR2Q9HBW0 351 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MOV10Q9HCE1 1003 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 Q9N2J8 555 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PPANQ9NQ55 473 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 CA10Q9NS85 328 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ASB6Q9NWX5 421 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TAS2R9Q9NYW1 312 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 EMC3Q9P0I2 261 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 MOKQ9UQ07 419 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.52□□□□□ -1.853e-19■■■■■ 78.9
SNHG1-220ENST00000544550 A0A1W2PRB8 838 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 A0A1W2PS29 197 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 DNAJC9-AS1A6NH13 148 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 C17orf51A8MQB3 221 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 ATP6V1G2-DDX39BF2Z307 99 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 H0YIV9 168 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 K7EPI3 171 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 TAPBPO15533 448 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 UGDHO60701 494 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 CRYAAP02489 173 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 OPN1LWP04000 364 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 ELANEP08246 267 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 OR4A8P0C604 315 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 EPORP19235 508 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 ACHEP22303 614 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 PSMA4P25789 261 aaKnown RBP3.52□□□□□ -1.85
SNHG1-220ENST00000544550 GABRB3P28472 473 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 SFTPDP35247 375 aa3.52□□□□□ -1.85
SNHG1-220ENST00000544550 FEN1P39748 380 aaKnown RBP3.52□□□□□ -1.85
SNHG1-220ENST00000544550 GP5P40197 560 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms