RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 MYBPHQ13203 477 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 HSPB2Q16082 182 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 SPATS1Q496A3 300 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 ULK3Q6PHR2 472 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 XKRXQ6PP77 449 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 TMPPEQ6ZT21 453 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 ASB5Q8WWX0 329 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 ROBO4Q8WZ75 1007 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 CPNE4Q96A23 557 aaPredicted RBP13.51□□□□□ -0.25
CD9-210ENST00000543916 INTS12Q96CB8 462 aaKnown RBP13.51□□□□□ -0.25
CD9-210ENST00000543916 DDIT4LQ96D03 193 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 HSH2DQ96JZ2 352 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 RNF122Q9H9V4 155 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 C12orf10Q9HB07 376 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 TMEM27Q9HBJ8 222 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 MAGEL2Q9UJ55 1249 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 MCTS1Q9ULC4 181 aaKnown RBP13.51□□□□□ -0.25
CD9-210ENST00000543916 HDGFL3Q9Y3E1 203 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 IGHV3-15A0A0B4J1V0 119 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ELOA3DA6NLF2 546 aaPredicted RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 A8MVM7 634 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 SULT2B1O00204 365 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 PDE5AO76074 875 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 LYPD3O95274 346 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 PMS2P2O95744 297 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 CLDN1O95832 211 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 PTNP21246 168 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 FKBP2P26885 142 aaKnown RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 MAP2K6P52564 334 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 RAC3P60763 192 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 CBX1P83916 185 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 EGR4Q05215 589 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 BNIP1Q12981 228 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ELOA3BQ3SY89 546 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ZNF613Q6PF04 617 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 DEF8Q6ZN54 512 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ARHGAP24Q8N264 748 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 FAM86B1Q8N7N1 296 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ELOA3Q8NG57 546 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 RNF217Q8TC41 542 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ADAMTS16Q8TE57 1224 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 DNAJA4Q8WW22 397 aaPredicted RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 ZFP3Q96NJ6 502 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 PRRG4Q9BZD6 226 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 GORASP2Q9H8Y8 452 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 TIGARQ9NQ88 270 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 PRPF19Q9UMS4 504 aaKnown RBP13.5□□□□□ -0.25
CD9-210ENST00000543916 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 MPDZO75970 2070 aa13.5□□□□□ -0.25
CD9-210ENST00000543916 DIDO1Q9BTC0 2240 aaKnown RBP13.49□□□□□ -0.25
CD9-210ENST00000543916 COL12A1Q99715 3063 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 IGKV1D-42A0A075B6H8 117 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 A1L4Q6 167 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 SMAD9O15198 467 aaKnown RBP13.49□□□□□ -0.25
CD9-210ENST00000543916 NPIPB7O75200 414 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 GMNNO75496 209 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 CLDN14O95500 239 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 PNMTP11086 282 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 FCGR2AP12318 317 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 ENPP1P22413 925 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 CTSSP25774 331 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 IDUAP35475 653 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 CSNK2A1P68400 391 aaPredicted RBP13.49□□□□□ -0.25
CD9-210ENST00000543916 OR2A2Q6IF42 318 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 WDR88Q6ZMY6 472 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 P3H2Q8IVL5 708 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 RELL2Q8NC24 303 aaPredicted RBP13.49□□□□□ -0.25
CD9-210ENST00000543916 LILRB4Q8NHJ6 448 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 STK35Q8TDR2 534 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 CA5BP1Q8WTZ4 195 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 PSMG3-AS1Q96PY0 264 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 POTEKPQ9BYX7 375 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 AMBRA1Q9C0C7 1298 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 RPS6KA6Q9UK32 745 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 CLEC4AQ9UMR7 237 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 DOPEY1Q5JWR5 2465 aa13.49□□□□□ -0.25
CD9-210ENST00000543916 LRRK2Q5S007 2527 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 A0A087WUJ7 227 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 A0A1W2PNV4 684 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 TRAPPC13A5PLN9 417 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 NKX2-6A6NCS4 301 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 ZNF814B7Z6K7 855 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 GYG2O15488 501 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 CHP2O43745 196 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 TNFSF13O75888 250 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 BMP5P22003 454 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 OR2B6P58173 313 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms