RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 TGFBR3Q03167 851 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 FAPQ12884 760 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 EPS8Q12929 822 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 SLC9B1Q4ZJI4 515 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 LIN52Q52LA3 116 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 ZNF311Q5JNZ3 666 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 MRPL2Q5T653 305 aaKnown RBP6.34□□□□□ -1.39
NUP43-206ENST00000543637 AGBL2Q5U5Z8 902 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 WBP2NLQ6ICG8 309 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 ABHD12BQ7Z5M8 362 aaPredicted RBP6.34□□□□□ -1.39
NUP43-206ENST00000543637 CADM2Q8N3J6 435 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 ZNF433Q8N7K0 673 aaPredicted RBP6.34□□□□□ -1.39
NUP43-206ENST00000543637 FAM71CQ8NEG0 241 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 SMAP2Q8WU79 429 aaPredicted RBP6.34□□□□□ -1.39
NUP43-206ENST00000543637 DNAJA3Q96EY1 480 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 ARL5BQ96KC2 179 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 OR11A1Q9GZK7 315 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 DLL4Q9NR61 685 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 CISD1Q9NZ45 108 aaKnown RBP6.34□□□□□ -1.39
NUP43-206ENST00000543637 OSGIN1Q9UJX0 560 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 POU2F3Q9UKI9 436 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 SLC9A8Q9Y2E8 581 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 USH1CQ9Y6N9 552 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 FBN2P35556 2912 aa6.34□□□□□ -1.39
NUP43-206ENST00000543637 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 NOTCH2Q04721 2471 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 A0A096LPI6 279 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CENPVL1A0A0U1RR11 272 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 TMEM72A0PK05 275 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 OR5H1A6NKK0 313 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CLDN24A6NM45 220 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 A8MVM7 634 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 EVPLLA8MZ36 301 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 H7C1Q1 480 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 AP3D1O14617 1153 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 RAD51DO75771 328 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 VAMP5O95183 116 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 PGM3O95394 542 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 WNT11O96014 354 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 HEXAP06865 529 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CHRM4P08173 479 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 GKN3PP0CG01 181 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 BMP4P12644 408 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ETFAP13804 333 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 IGHV1-2P23083 117 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 PPIBP23284 216 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 PAX7P23759 505 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 GTF2E2P29084 291 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 IRX1P78414 480 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 BSPH1Q075Z2 132 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 FUT5Q11128 374 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 FADDQ13158 208 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CEACAM7Q14002 265 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 RGNQ15493 299 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ETFDHQ16134 617 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 KRTAP21-3Q3LHN1 58 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ZNF672Q499Z4 452 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 COX20Q5RI15 118 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 BEND6Q5SZJ8 279 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 OTUD3Q5T2D3 398 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 C1QTNF12Q5T7M4 302 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 AGAP6Q5VW22 663 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 SLC22A25Q6T423 547 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 EPGNQ6UW88 154 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CASP12Q6UXS9 341 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 Q71RC1 249 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 AAED1Q7RTV5 226 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 VRK2Q86Y07 508 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 KRT73Q86Y46 540 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CCDC103Q8IW40 242 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 FBXL14Q8N1E6 418 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 OR52N5Q8NH56 324 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ZNF524Q96C55 264 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 TLCD1Q96CP7 247 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 MAELQ96JY0 434 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 ADAD1Q96M93 576 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 TMEM204Q9BSN7 226 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 SF3B5Q9BWJ5 86 aaKnown RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 SPATA9Q9BWV2 254 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ADAM19Q9H013 955 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 PIF1Q9H611 641 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 TCF7L2Q9NQB0 619 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 SDR39U1Q9NRG7 319 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 TAS2R16Q9NYV7 291 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 CORO2BQ9UQ03 480 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 ZNF443Q9Y2A4 671 aaPredicted RBP6.33□□□□□ -1.4
NUP43-206ENST00000543637 AMDHD2Q9Y303 409 aa6.33□□□□□ -1.4
NUP43-206ENST00000543637 LRBAP50851 2863 aa6.32□□□□□ -1.4
NUP43-206ENST00000543637 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
NUP43-206ENST00000543637 CDHR4A6H8M9 788 aa6.32□□□□□ -1.4
NUP43-206ENST00000543637 DPRXA6NFQ7 191 aa6.32□□□□□ -1.4
NUP43-206ENST00000543637 ELOA3DA6NLF2 546 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms