RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	LEF1	Q9UJU2	399 aa	Predicted RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF221	Q9UK13	617 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RBMX2	Q9Y388	322 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	NPFFR2	Q9Y5X5	522 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DSCAM	O60469	2012 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324		A0A0G2JNJ9	132 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	C1orf226	A1L170	272 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TMEM89	A2RUT3	159 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	AGAP5	A6NIR3	686 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FAM25A	B3EWG3	89 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FAM25C	B3EWG5	89 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FAM25G	B3EWG6	89 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324		B4DXG7	233 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	NPIPB8	E9PQR5	432 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	NR5A2	O00482	541 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	T	O15178	435 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CDC40	O60508	579 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PDE9A	O76083	593 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PRKD3	O94806	890 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324		P04436	131 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	KRT8	P05787	483 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	HPN	P05981	417 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	KLK1	P06870	262 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ABCB1	P08183	1280 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	EPX	P11678	715 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	IL7R	P16871	459 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	NAGA	P17050	411 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	LBP	P18428	481 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TNNI3	P19429	210 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TACR1	P25103	407 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ABCD3	P28288	659 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PTPN6	P29350	595 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CEACAM8	P31997	349 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ZFP36L2	P47974	494 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	EMD	P50402	254 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PRSS12	P56730	875 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	DEFA1	P59665	94 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	DEFA3	P59666	94 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TRA2B	P62995	288 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PLGLB1	Q02325	96 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CLC	Q05315	142 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	LIPE	Q05469	1076 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CD47	Q08722	323 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CSTF3	Q12996	717 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF267	Q14586	743 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	OCLN	Q16625	522 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CTU2	Q2VPK5	515 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FBXL19-AS1	Q494R0	122 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF404	Q494X3	552 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FAM98B	Q52LJ0	330 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	UNC50	Q53HI1	259 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	RIPPLY2	Q5TAB7	128 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PRAMEF20	Q5VT98	475 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	KANK2	Q63ZY3	851 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	BICRAL	Q6AI39	1079 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CYP20A1	Q6UW02	462 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	SLC29A4	Q7RTT9	530 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PAGE2	Q7Z2X7	111 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ADGRE4P	Q86SQ3	457 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	LIX1L	Q8IVB5	337 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	RFLNB	Q8N5W9	214 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	RELL2	Q8NC24	303 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	SETD9	Q8NE22	299 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	IL17RD	Q8NFM7	739 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	OR4K14	Q8NGD5	310 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	OR9I1	Q8NGQ6	314 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	OR6F1	Q8NGZ6	308 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	SETD6	Q8TBK2	473 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FCGR1B	Q92637	280 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	RORB	Q92753	470 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PROX1	Q92786	737 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TMBIM1	Q969X1	311 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CNRIP1	Q96F85	164 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TMEM41A	Q96HV5	264 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	NSMCE2	Q96MF7	247 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	SIGLEC11	Q96RL6	698 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TRAF4	Q9BUZ4	470 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CNPPD1	Q9BV87	410 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	CHID1	Q9BWS9	393 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	UGT2B28	Q9BY64	529 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ACPT	Q9BZG2	426 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	BRINP2	Q9C0B6	783 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	PRDM14	Q9GZV8	571 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	NXF5	Q9H1B4	397 aa	Known RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	OR10A5	Q9H207	317 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TOR3A	Q9H497	397 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	MAGIX	Q9H6Y5	334 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	AKTIP	Q9H8T0	292 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	GORASP2	Q9H8Y8	452 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	FN3KRP	Q9HA64	309 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	AIG1	Q9NVV5	245 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	ZIM2	Q9NZV7	527 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324		Q9UFV3	132 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	EGFL7	Q9UHF1	273 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	BOK	Q9UMX3	212 aa	Predicted RBP	5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TRAPPC4	Q9Y296	219 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	AP3M1	Q9Y2T2	418 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	TPRKB	Q9Y3C4	175 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	GPR45	Q9Y5Y3	372 aa		5.8	□□□□□ -1.48
CIT-213	ENST00000543324	LYST	Q99698	3801 aa		5.79	□□□□□ -1.48

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