RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 RNF170Q96K19 258 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 WACQ9BTA9 647 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 KLHL1Q9NR64 748 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 LRIT1Q9P2V4 623 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 ERVK-19Q9WJR5 959 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 OR10H1Q9Y4A9 318 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 CLDN16Q9Y5I7 305 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 CLCA3PQ9Y6N3 262 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 UNC80Q8N2C7 3258 aa17.1■□□□□ 0.33
COPS7A-215ENST00000543155 OGG1O15527 345 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 SLC43A1O75387 559 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 YES1P07947 543 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 PITPNBP48739 271 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 BTG2P78543 158 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 FUT7Q11130 342 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 ERV3-1Q14264 604 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 NNATQ16517 81 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 NDUFAF6Q330K2 333 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 COL13A1Q5TAT6 717 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 DPY19L2P2Q6ZN68 376 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 NOXA1Q86UR1 476 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 SLC35F2Q8IXU6 374 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 ARL14Q8N4G2 192 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 C16orf52Q8NHV5 167 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 TRMT10AQ8TBZ6 339 aaKnown RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 RFT1Q96AA3 541 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 FYTTD1Q96QD9 318 aaKnown RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 GDF15Q99988 308 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 MARVELD1Q9BSK0 173 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 OR10A5Q9H207 317 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 TRAV1-2A0A0B4J238 106 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 A0A1W2PPC4 97 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 A0A1W2PRG6 482 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 ORC5O43913 435 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 RAB3BP20337 219 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 S100A1P23297 94 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 CAPZBP47756 277 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 PGDP52209 483 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 GBX2P52951 348 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 ZNF440Q8IYI8 595 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 TCTE3Q8IZS6 198 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 SMIM19Q96E16 107 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 MAP3K3Q99759 626 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 WSB2Q9NYS7 404 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-215ENST00000543155 NPFFR2Q9Y5X5 522 aa17.09■□□□□ 0.33
COPS7A-215ENST00000543155 FAM47E-STBD1D6RA91 191 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 AGRPO00253 132 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 GLULP15104 373 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 MAOAP21397 527 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 RPL4P36578 427 aaKnown RBP17.08■□□□□ 0.33
COPS7A-215ENST00000543155 GDI2P50395 445 aaKnown RBP17.08■□□□□ 0.33
COPS7A-215ENST00000543155 CD83Q01151 205 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 CDK5R1Q15078 307 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 CDONQ4KMG0 1287 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 LRRC17Q8N6Y2 441 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 OR13C5Q8NGS8 318 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 THAP7Q9BT49 309 aaPredicted RBP17.08■□□□□ 0.33
COPS7A-215ENST00000543155 TTTY10Q9BZA0 68 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 ZNF337Q9Y3M9 751 aa17.08■□□□□ 0.33
COPS7A-215ENST00000543155 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
COPS7A-215ENST00000543155 TDRD6O60522 2096 aaKnown RBP17.08■□□□□ 0.32
COPS7A-215ENST00000543155 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 OR7A10O76100 309 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 NAA10P41227 235 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-215ENST00000543155 HCCSP53701 268 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 HSD17B7P56937 341 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 PON3Q15166 354 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 SLC25A35Q3KQZ1 300 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 SLC35D3Q5M8T2 416 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 Q6ZS52 159 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
COPS7A-215ENST00000543155 OR14A16Q8NHC5 309 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 FAM174AQ8TBP5 190 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 TRIM63Q969Q1 353 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 CREB3L1Q96BA8 519 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 PELI1Q96FA3 418 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 BEX2Q9BXY8 128 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 SLC19A3Q9BZV2 496 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 ADAM18Q9Y3Q7 739 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 SLCO1B1Q9Y6L6 691 aa17.08■□□□□ 0.32
COPS7A-215ENST00000543155 LRRN3E7EW58 273 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 ARPC3O15145 178 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 CD1AP06126 327 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 PROS1P07225 676 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 DIO1P49895 249 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 ISXQ2M1V0 245 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 HACD4Q5VWC8 232 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 PYHIN1Q6K0P9 492 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 ZNF615Q8N8J6 731 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 OR4C3Q8NH37 302 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 THAP4Q8WY91 577 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 C3orf49Q96BT1 292 aa17.07■□□□□ 0.32
COPS7A-215ENST00000543155 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms