RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 FBXO7Q9Y3I1 522 aa12.24□□□□□ -0.45
TNC-212ENST00000542877 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 ADAM23O75077 832 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 LIPCP11150 499 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 PSMB5P28074 263 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 GDNFP39905 211 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 CLDN6P56747 220 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 OPCMLQ14982 345 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 ZNF852Q6ZMS4 543 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 FAM160A2Q8N612 972 aaPredicted RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 OR13C2Q8NGS9 318 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 GMPR2Q9P2T1 348 aaKnown RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 TEX51A0A1B0GUA7 166 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 B4DXG7 233 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 FURINP09958 794 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 RPS2P15880 293 aaKnown RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 HOXD9P28356 352 aaPredicted RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 APLNRP35414 380 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 EFNA3P52797 238 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 SIRPAP78324 504 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 C22orf15Q8WYQ4 148 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 UGT2A1Q9Y4X1 527 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 ANKRD33BA6NCL7 494 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 NUDT21O43809 227 aaKnown RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 GMDSO60547 372 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 IMPA1P29218 277 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 OTX2P32243 289 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 TRAPPC6BQ86SZ2 158 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 MICU1Q9BPX6 476 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 SLC46A2Q9BY10 475 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 STARD5Q9NSY2 213 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 ANKRD30BLA7E2S9 258 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 ARSAP15289 507 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 ZNF28P17035 718 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 AFF3P51826 1226 aaKnown RBP12.23□□□□□ -0.45
TNC-212ENST00000542877 SRYQ05066 204 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 OR7E24Q6IFN5 339 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 SFXN4Q6P4A7 337 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 PGBD5Q8N414 524 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 FRZBQ92765 325 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 COPS3Q9UNS2 423 aa12.23□□□□□ -0.45
TNC-212ENST00000542877 PRSS38A1L453 326 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 SYT5O00445 386 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 IGHG1P01857 330 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 MRPL41Q8IXM3 137 aaKnown RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 DUSP19Q8WTR2 217 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 HCAR1Q9BXC0 346 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 A4GALTQ9NPC4 353 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 POU2F3Q9UKI9 436 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 HHLA1C9JL84 531 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ATP1B3P54709 279 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 SLC14A1Q13336 389 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 COL9A2Q14055 689 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 VASNQ6EMK4 673 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 SLCO4C1Q6ZQN7 724 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 FUNDC1Q8IVP5 155 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 HRH4Q9H3N8 390 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 SLC9B1P1A6NJY1 282 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ZNF705FA8MVS1 300 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 TNFRSF10AO00220 468 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 SDC3O75056 442 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 CSO75390 466 aaKnown RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 CDCA3Q99618 268 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 PAPOLGQ9BWT3 736 aaKnown RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 HCFC1R1Q9NWW0 138 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 EHFQ9NZC4 300 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 VSX1Q9NZR4 365 aaPredicted RBP12.22□□□□□ -0.45
TNC-212ENST00000542877 ANKRD12Q6UB98 2062 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 TRIM64BA6NI03 449 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ZBTB42B2RXF5 422 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 CEBPBP17676 345 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ABHD17BQ5VST6 288 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ABHD4Q8TB40 342 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 MIB2Q96AX9 1013 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 CLSTN3Q9BQT9 956 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 TPSD1Q9BZJ3 242 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 NMNAT2Q9BZQ4 307 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 TMEM38AQ9H6F2 299 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 ASIC5Q9NY37 505 aa12.22□□□□□ -0.45
TNC-212ENST00000542877 A6NCN8 305 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 SURF4O15260 269 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 ELAVL4P26378 380 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 HTR1FP30939 366 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 TNK1Q13470 666 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 EXOSC6Q5RKV6 272 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 NDUFAF7Q7L592 441 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms