RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 HOXC8P31273 242 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 S100A11P31949 105 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ARL2P36404 184 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OMPP47874 163 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 KCNJ3P48549 501 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 GMPSP49915 693 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 GNG10P50151 68 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OAZ1P54368 228 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CASP6P55212 293 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 EIF5AP63241 154 aaKnown RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SEMG2Q02383 582 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 EMX2Q04743 252 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 YWHAHQ04917 246 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 LIPEQ05469 1076 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SCARB2Q14108 478 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 PEA15Q15121 130 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 IRF4Q15306 451 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 INPP5JQ15735 1006 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SNAPC1Q16533 368 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ANXA2RQ3ZCQ2 193 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 PYDC2Q56P42 97 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF628Q5EBL2 1059 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SGO1Q5FBB7 561 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FAM69AQ5T7M9 428 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 JADE1Q6IE81 842 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FRMPD2BQ6IN97 320 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CDC73Q6P1J9 531 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CLEC2AQ6UVW9 174 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ATRAIDQ6UW56 229 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 KDELC2Q7Z4H8 507 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SPATA19Q7Z5L4 167 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OAFQ86UD1 273 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FAM131BQ86XD5 332 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FUNDC1Q8IVP5 155 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CCDC117Q8IWD4 279 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 DCUN1D3Q8IWE4 304 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ZBTB8OSQ8IWT0 167 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CPXCR1Q8N123 301 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FTMTQ8N4E7 242 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ARRDC1Q8N5I2 433 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SPICQ8N5J4 248 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 PXT1Q8NFP0 134 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OR56A4Q8NGH8 313 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OR4K15Q8NH41 348 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 JOSD2Q8TAC2 188 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 HMGCLL1Q8TB92 370 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 TMEM163Q8TC26 289 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 FAM216AQ8WUB2 273 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ASB5Q8WWX0 329 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 LCN9Q8WX39 176 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ARNTL2Q8WYA1 636 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ROBO4Q8WZ75 1007 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CENPIQ92674 756 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SLC25A46Q96AG3 418 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 PYCR2Q96C36 320 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 MSI2Q96DH6 328 aaKnown RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 RAB3CQ96E17 227 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 L3HYPDHQ96EM0 354 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 BSCL2Q96G97 398 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF385AQ96PM9 386 aaKnown RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 MTERF1Q99551 399 aaKnown RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CMSS1Q9BQ75 279 aaKnown RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 GINS4Q9BRT9 223 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 GGACTQ9BVM4 153 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 TAPBPLQ9BX59 468 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 TOLLIPQ9H0E2 274 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 OR51J1Q9H342 316 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 DPAGT1Q9H3H5 408 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 AAMDCQ9H7C9 122 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 TUBA4BQ9H853 241 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 THSD1Q9NS62 852 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SLC22A11Q9NSA0 550 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 TEX10Q9NXF1 929 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CCDC167Q9P0B6 97 aa5.36□□□□□ -1.55
XRCC4-206ENST00000542685 NFKBIL1Q9UBC1 381 aaPredicted RBP5.36□□□□□ -1.55
XRCC4-206ENST00000542685 CITO14578 2027 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 PDCD11Q14690 1871 aaKnown RBP5.35□□□□□ -1.55
XRCC4-206ENST00000542685 A0A096LPK6 155 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 IGKV6D-21A0A0A0MT36 114 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 A0A0J9YYE9 177 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 LOC100506127A0A0U1RQW1 187 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 A0A1W2PPC4 97 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 HYKKA2RU49 373 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 M0QZ92 97 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 GNGT2O14610 69 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 CASKO14936 926 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 PLOD3O60568 738 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 SOCS5O75159 536 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 C22orf31O95567 290 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 CFDP00746 253 aaPredicted RBP5.35□□□□□ -1.55
XRCC4-206ENST00000542685 CST1P01037 141 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 VIPP01282 170 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 MT-ND4LP03901 98 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 STAG3L1P0CL83 205 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 THEGLP0DJG4 465 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 AKR1A1P14550 325 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 PKMP14618 531 aaKnown RBP5.35□□□□□ -1.55
XRCC4-206ENST00000542685 GABRA1P14867 456 aa5.35□□□□□ -1.55
XRCC4-206ENST00000542685 CPN1P15169 458 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms