RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 OR2T1O43869 369 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 ZG16O60844 167 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 ZNF682O95780 498 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 IFNW1P05000 195 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 HOXB6P17509 224 aaKnown RBP16.84■□□□□ 0.29
VPS33A-205ENST00000541169 CTSSP25774 331 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 HTR2AP28223 471 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 DIO1P49895 249 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 SLC35A1P78382 337 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 ADORA2A-AS1P86434 159 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 SRSF1Q07955 248 aaKnown RBP eCLIP16.84■□□□□ 0.29
VPS33A-205ENST00000541169 TRIM25Q14258 630 aaKnown RBP16.84■□□□□ 0.29
VPS33A-205ENST00000541169 MFSD13AQ14CX5 517 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 SLC25A35Q3KQZ1 300 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 COMTD1Q86VU5 262 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 OR6S1Q8NH40 331 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 LILRB4Q8NHJ6 448 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 LRRC46Q96FV0 321 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 NSMCE2Q96MF7 247 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 MMADHCQ9H3L0 296 aaPredicted RBP16.84■□□□□ 0.29
VPS33A-205ENST00000541169 ACTR3BQ9P1U1 418 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 EGFL7Q9UHF1 273 aa16.84■□□□□ 0.29
VPS33A-205ENST00000541169 A0A087WUJ7 227 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 TMEM229AB2RXF0 380 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 CXCL13O43927 109 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 OR5F1O95221 314 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 GPIP06744 558 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 TMIGD3P0DMS9 266 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ITGA2P17301 1181 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 TCN1P20061 433 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ENPP1P22413 925 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 AGFG1P52594 562 aaKnown RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 HOXC5Q00444 222 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 MYBPHQ13203 477 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 CEACAM7Q14002 265 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 NCOA6Q14686 2063 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ZNF239Q16600 458 aaKnown RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ENTPD8Q5MY95 495 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 SEM1Q6ZVN7 128 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 CYP4Z1Q86W10 505 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 MCEMP1Q8IX19 187 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 VANGL1Q8TAA9 524 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 FNDC9Q8TBE3 224 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ADAMTS16Q8TE57 1224 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ITLN2Q8WWU7 325 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 ASB9Q96DX5 294 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 GMPPAQ96IJ6 420 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 NAA11Q9BSU3 229 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 TMEM43Q9BTV4 400 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 TAPBPLQ9BX59 468 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 SLC19A3Q9BZV2 496 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 PIGMQ9H3S5 423 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 RNF6Q9Y252 685 aa16.83■□□□□ 0.28
VPS33A-205ENST00000541169 KLF2Q9Y5W3 355 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-205ENST00000541169 MED12Q93074 2177 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 GCN1Q92616 2671 aaKnown RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 A0A0G2JNJ9 132 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 TMEM72A0PK05 275 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 H0YC42 278 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 DNAJC8O75937 253 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 AHSA1O95433 338 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 CLDN14O95500 239 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 PLGP00747 810 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 IDUAP35475 653 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 TPD52P55327 224 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 TRAP1Q12931 704 aaKnown RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 C1orf140Q5VVS0 124 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 RPRMLQ8N4K4 120 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 RNF128Q8TEB7 428 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 SDCCAG3Q96C92 435 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 ZNF845Q96IR2 970 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-205ENST00000541169 KLHL9Q9P2J3 617 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 Q9UFV3 132 aa16.82■□□□□ 0.28
VPS33A-205ENST00000541169 EBAG9O00559 213 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 ARPC2O15144 300 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TPST2O60704 377 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 NPIPB7O75200 414 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 PRKD3O94806 890 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TOXO94900 526 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TGM6O95932 706 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 OPN1LWP04000 364 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 NCK1P16333 377 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 CCNA2P20248 432 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 SHC1P29353 583 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 RBM34P42696 430 aaKnown RBP16.81■□□□□ 0.28
VPS33A-205ENST00000541169 CDH12P55289 794 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TAS2R41P59536 307 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 ST3GAL3Q11203 375 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 PDK3Q15120 406 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 NPTX1Q15818 432 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 FCRLAQ7L513 359 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 MAMDC2Q7Z304 686 aaPredicted RBP16.81■□□□□ 0.28
VPS33A-205ENST00000541169 DHFR2Q86XF0 187 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 FAM156AQ8NDB6 213 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 MFSD8Q8NHS3 518 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 PIGXQ8TBF5 258 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 MCUR1Q96AQ8 359 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms