RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 INIPQ9NRY2 104 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 C1orf123Q9NWV4 160 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SHPKQ9UHJ6 478 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 TRAV27A0A087WT01 109 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 CDC123O75794 336 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SERPINF1P36955 418 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 MFGE8Q08431 387 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 YIF1BQ5BJH7 314 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 VASH1Q7L8A9 365 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 MEX3DQ86XN8 651 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SLC30A7Q8NEW0 376 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 TSTD1Q8NFU3 115 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SLC2A12Q8TD20 617 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 TUBB1Q9H4B7 451 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 CPEP16870 476 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 FBLP22087 321 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 KCNJ5P48544 419 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SSTP61278 116 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 CARD17Q5XLA6 110 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 STEAP1BQ6NZ63 245 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 TRAPPC6BQ86SZ2 158 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 NEURL3Q96EH8 262 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 SMIM3Q9BZL3 60 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 HOXC11O43248 304 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 EDN1P05305 212 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 RAC2P15153 192 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 IGFBP4P22692 258 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 PRLHRP49683 370 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 CCR6P51684 374 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 HTD2P86397 168 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 DLX2Q07687 328 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 P4HA3Q7Z4N8 544 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 ZNF480Q8WV37 535 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 TBC1D20Q96BZ9 403 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 ERVMER34-1Q9H9K5 563 aa13.97□□□□□ -0.17
SMARCA4-207ENST00000541122 CIB4A0PJX0 185 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SURF4O15260 269 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SEC14L5O43304 696 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 FBXO24O75426 580 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 PAPLNO95428 1278 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 GYPBP06028 91 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 LIPCP11150 499 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 MAGEB1P43366 347 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 EMP2P54851 167 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 HIST2H3PS2Q5TEC6 136 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SAXO2Q658L1 398 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 ASB13Q8WXK3 278 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 MIB2Q96AX9 1013 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 ENTPD2Q9Y5L3 495 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 GABARAPH6UMI1 98 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 PPP1R2P9O14990 202 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 OR2F2O95006 317 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 FURINP09958 794 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SPI1P17947 270 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 CD53P19397 219 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SELENBP1Q13228 472 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 OR2F1Q13607 317 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 ELOCQ15369 112 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 MPEG1Q2M385 716 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SOHLH1Q5JUK2 328 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SLAMF9Q96A28 289 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 FBXL4Q9UKA2 621 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 FAM221BA6H8Z2 402 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 C1orf105O95561 183 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 HIST1H1TP22492 207 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 HOXC13P31276 330 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 RPP30P78346 268 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 OVCH1Q7RTY7 1134 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SLC22A8Q8TCC7 542 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 SORBS1Q9BX66 1292 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 UFSP2Q9NUQ7 469 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 RLIMQ9NVW2 624 aa13.96□□□□□ -0.17
SMARCA4-207ENST00000541122 LFNGQ8NES3 379 aa13.96□□□□□ -0.18
SMARCA4-207ENST00000541122 RAB39BQ96DA2 213 aa13.96□□□□□ -0.18
SMARCA4-207ENST00000541122 MYEF2Q9P2K5 600 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-207ENST00000541122 BLACEA4D250 179 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 CD300LBA8K4G0 201 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 EDIL3O43854 480 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 PIP5K1CO60331 668 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 FAM26EQ8N5C1 309 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ANKRD53Q8N9V6 530 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 CHST14Q8NCH0 376 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 KLHDC7BQ96G42 594 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 DDOQ99489 341 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 SAMD10Q9BYL1 202 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ACTL7AQ9Y615 435 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 IGLON5A6NGN9 336 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 GPX5O75715 221 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 FGF18O76093 207 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 SYNGR4O95473 234 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms