RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 RAI1Q7Z5J4 1906 aaPredicted RBP11.68□□□□□ -0.54
LTBR-208ENST00000541005 IGKV3D-15A0A087WSY6 115 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 A6NNC1 897 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 ZNF724A8MTY0 619 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 TMEM229AB2RXF0 380 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 MRASO14807 208 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 CCDC22O60826 627 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 SERPINB7O75635 380 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 CTAG2O75638 210 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 MFN2O95140 757 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 YES1P07947 543 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 TFPIP10646 304 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 POU2F1P14859 743 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 KLK2P20151 261 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 UGT2B10P36537 528 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 SLC16A1P53985 500 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 KRTAP10-9P60411 292 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 H3F3AP84243 136 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 TMEM201Q5SNT2 666 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 ATG4DQ86TL0 474 aaPredicted RBP11.67□□□□□ -0.54
LTBR-208ENST00000541005 CALHM3Q86XJ0 350 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 LSMEM1Q8N8F7 131 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 PCYOX1LQ8NBM8 494 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 C3orf49Q96BT1 292 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 DDIT4LQ96D03 193 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 ZHX1-C8orf76Q96EF9 292 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 C12orf10Q9HB07 376 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 TMEM181Q9P2C4 612 aa11.67□□□□□ -0.54
LTBR-208ENST00000541005 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
LTBR-208ENST00000541005 PLCE1Q9P212 2302 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 IGHV3-15A0A0B4J1V0 119 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 ZC3H12DA2A288 527 aaKnown RBP11.66□□□□□ -0.54
LTBR-208ENST00000541005 SH3D21A4FU49 640 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 DYNC1I1O14576 645 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 FRS3O43559 492 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 TPST1O60507 370 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 FZD7O75084 574 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 NPIPB7O75200 414 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
LTBR-208ENST00000541005 HTR2AP28223 471 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 AQP1P29972 269 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 LSP1P33241 339 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 SLC35A1P78382 337 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 DMTNQ08495 405 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 RASGEF1BQ0VAM2 473 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 MMEL1Q495T6 779 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 RABL3Q5HYI8 236 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 TFAP2EQ6VUC0 442 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 PATL1Q86TB9 770 aaKnown RBP11.66□□□□□ -0.54
LTBR-208ENST00000541005 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 TUSC5Q8IXB3 177 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 CADM2Q8N3J6 435 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 OR10A6Q8NH74 314 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 RP9Q8TA86 221 aaKnown RBP11.66□□□□□ -0.54
LTBR-208ENST00000541005 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 FANCFQ9NPI8 374 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 ARMCX1Q9P291 453 aa11.66□□□□□ -0.54
LTBR-208ENST00000541005 DSCAMO60469 2012 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 HEATR1Q9H583 2144 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 ZNF716A6NP11 495 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 A8MVM7 634 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 C16orf97H3BN30 126 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 EIF1BO60739 113 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 C8BP07358 591 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 IMPDH2P12268 514 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 CCNA2P20248 432 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 DRD4P21917 467 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 CXCR1P25024 350 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 SEC24CP53992 1094 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 RGS8P57771 180 aaPredicted RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 VMACQ2NL98 169 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 GLIPR1L2Q4G1C9 344 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 INTS11Q5TA45 600 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 PAQR6Q6TCH4 344 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 CCDC80Q76M96 950 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 NUFIP2Q7Z417 695 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 LINC01560Q8TB33 94 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 STK35Q8TDR2 534 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 TRIM2Q9C040 744 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 MYLK2Q9H1R3 596 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 RASSF1Q9NS23 344 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 GID8Q9NWU2 228 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 NDRG3Q9UGV2 375 aa11.65□□□□□ -0.54
LTBR-208ENST00000541005 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
LTBR-208ENST00000541005 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ZNF814B7Z6K7 855 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 GPR171O14626 319 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 SNX3O60493 162 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 FMO6PO60774 539 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 KRT34O76011 436 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms