RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 MRPS18AQ9NVS2 196 aaKnown RBP13□□□□□ -0.33
INO80E-203ENST00000540562 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
INO80E-203ENST00000540562 EXOGQ9Y2C4 368 aaKnown RBP13□□□□□ -0.33
INO80E-203ENST00000540562 CIB4A0PJX0 185 aa13□□□□□ -0.33
INO80E-203ENST00000540562 THBS2P35442 1172 aa13□□□□□ -0.33
INO80E-203ENST00000540562 ATP12AP54707 1039 aa13□□□□□ -0.33
INO80E-203ENST00000540562 UBE2MP61081 183 aaKnown RBP13□□□□□ -0.33
INO80E-203ENST00000540562 PRAMEF17Q5VTA0 474 aa13□□□□□ -0.33
INO80E-203ENST00000540562 HEPHL1Q6MZM0 1159 aa13□□□□□ -0.33
INO80E-203ENST00000540562 Q6ZSR6 202 aa13□□□□□ -0.33
INO80E-203ENST00000540562 GID4Q8IVV7 300 aa13□□□□□ -0.33
INO80E-203ENST00000540562 ZNF655Q8N720 491 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 OR13H1Q8NG92 308 aa13□□□□□ -0.33
INO80E-203ENST00000540562 ZNF431Q8TF32 576 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 DPCDQ9BVM2 203 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
INO80E-203ENST00000540562 KLF15Q9UIH9 416 aa13□□□□□ -0.33
INO80E-203ENST00000540562 ZNF223Q9UK11 482 aaPredicted RBP13□□□□□ -0.33
INO80E-203ENST00000540562 FANCMQ8IYD8 2048 aa13□□□□□ -0.33
INO80E-203ENST00000540562 A0A1W2PQF6 199 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 CARNS1A5YM72 827 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 WNT1P04628 370 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 DBIP07108 87 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 NTSR1P30989 418 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 DUSP8Q13202 625 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 SQSTM1Q13501 440 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 MRGPREQ86SM8 312 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 GJD3Q8N144 294 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 CEP76Q8TAP6 659 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PELI1Q96FA3 418 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 RBM18Q96H35 190 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 SFXN1Q9H9B4 322 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 CMC2Q9NRP2 79 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 KLK11Q9UBX7 282 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ABCA7Q8IZY2 2146 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 PLRG1O43660 514 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 RCBTB2O95199 551 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PLGP00747 810 aaPredicted RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ZNF81P51508 661 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 TMEM255AQ5JRV8 349 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 RNLSQ5VYX0 342 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ABHD13Q7L211 337 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 WDR92Q96MX6 357 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 SERINC2Q96SA4 455 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 NOX4Q9NPH5 578 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 PHF11Q9UIL8 331 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 RCE1Q9Y256 329 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 CHP2O43745 196 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 GMDSO60547 372 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 OR8G3PP0DMU2 310 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 EIPR1Q53HC9 387 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 NUDT18Q6ZVK8 323 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 LNX2Q8N448 690 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ZNF527Q8NB42 609 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 MOSPD2Q8NHP6 518 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 ZFAND1Q8TCF1 268 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 SLC37A2Q8TED4 501 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 GIMAP1Q8WWP7 306 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 CCDC120Q96HB5 630 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 MCCC2Q9HCC0 563 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PILRAQ9UKJ1 303 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 PPIEQ9UNP9 301 aaKnown RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 C19orf53Q9UNZ5 99 aaPredicted RBP12.99□□□□□ -0.33
INO80E-203ENST00000540562 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 COL6A3P12111 3177 aa12.99□□□□□ -0.33
INO80E-203ENST00000540562 SLC22A31A6NKX4 558 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 GPR75O95800 540 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 MAS1P04201 325 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 F8A1P23610 371 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
INO80E-203ENST00000540562 BTCP35070 178 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 RPS15P62841 145 aaKnown RBP12.98□□□□□ -0.33
INO80E-203ENST00000540562 PSG6Q00889 435 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 LRRC28Q86X40 367 aaPredicted RBP12.98□□□□□ -0.33
INO80E-203ENST00000540562 RPLP0P6Q8NHW5 317 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 Q96M85 177 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 GDF15Q99988 308 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 PITHD1Q9GZP4 211 aaPredicted RBP12.98□□□□□ -0.33
INO80E-203ENST00000540562 NANSQ9NR45 359 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 POLHQ9Y253 713 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 SLC35A3Q9Y2D2 325 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 PRR32B1ATL7 298 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 TCRBP04435 133 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 ADH7P40394 386 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 GNG2P59768 71 aa12.98□□□□□ -0.33
INO80E-203ENST00000540562 ILF3Q12906 894 aaKnown RBP eCLIP12.98□□□□□ -0.33
INO80E-203ENST00000540562 PRICKLE4Q2TBC4 344 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms