RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 C6orf120Q7Z4R8 191 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HSD17B13Q7Z5P4 300 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ABI3BPQ7Z7G0 1075 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 VRK3Q8IV63 474 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 OR6V1Q8N148 313 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 MS4A15Q8N5U1 240 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TRAM1L1Q8N609 369 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ANKRD53Q8N9V6 530 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF248Q8NDW4 579 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 OR11H4Q8NGC9 324 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 OR2T4Q8NH00 348 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SVIPQ8NHG7 77 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 CDC26Q8NHZ8 85 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SLC2A12Q8TD20 617 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 PTP4A1Q93096 173 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 RGMAQ96B86 450 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 PHF21AQ96BD5 680 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SGTBQ96EQ0 304 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM19Q96HH6 336 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 LMLNQ96KR4 655 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 MRI1Q9BV20 369 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 PINK1Q9BXM7 581 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 REG4Q9BYZ8 158 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DNTTIP1Q9H147 329 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 CXorf36Q9H7Y0 433 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZC4H2Q9NQZ6 224 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF224Q9NZL3 707 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF624Q9P2J8 865 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 P2RX2Q9UBL9 471 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4Q9UBX2 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF222Q9UK12 451 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HECTD1Q9ULT8 2610 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ARPC4-TTLL3A0A0A6YYG9 625 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 NPIPB15A6NHN6 443 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SNRPGP15A8MWD9 76 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 M0R233 179 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ABCD4O14678 606 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 LRRTM2O43300 516 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 RNF13O43567 381 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 PLPP2O43688 288 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF821O75541 412 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 STX11O75558 287 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 RGS11O94810 467 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 OR2A4O95047 310 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SOX14O95416 240 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 MPC2O95563 127 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SERPINA3P01011 423 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 WNT1P04628 370 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 GP1BAP07359 652 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 GIPP09681 153 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 FPR3P25089 353 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 IMPA1P29218 277 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 PPP2R1BP30154 601 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 HOXC12P31275 282 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 THBS2P35442 1172 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 HSD17B2P37059 387 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 FEN1P39748 380 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CSKP41240 450 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CCT3P49368 545 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SGSHP51688 502 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CDH11P55287 796 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 TAS2R50P59544 299 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 AP3S2P59780 193 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SNRPNP63162 240 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 RNF4P78317 190 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 S100A12P80511 92 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 MRPS10P82664 201 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CFHR1Q03591 330 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 FGFBP1Q14512 234 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 KRT33BQ14525 404 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ELAVL3Q14576 367 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF267Q14586 743 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF273Q14593 569 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 OPCMLQ14982 345 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SF1Q15637 639 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 DECR1Q16698 335 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 C9orf64Q5T6V5 341 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 BCL2L15Q5TBC7 163 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 OR2G6Q5TZ20 316 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SMARCD3Q6STE5 483 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 WASH2PQ6VEQ5 465 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 UTS2BQ765I0 119 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 KANSL1Q7Z3B3 1105 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 PXKQ7Z7A4 578 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SLC9B2Q86UD5 537 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CACUL1Q86Y37 369 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 NRSN1Q8IZ57 195 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 KRT78Q8N1N4 520 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 UBE2J2Q8N2K1 259 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SLC43A2Q8N370 569 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 ACBD7Q8N6N7 88 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 HORMAD2Q8N7B1 307 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SFXN5Q8TD22 340 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SKA2Q8WVK7 121 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms