RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 OR52N5Q8NH56 324 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF75CPQ92670 426 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-211ENST00000539843 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 OR52E6Q96RD3 313 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-211ENST00000539843 FKRPQ9H9S5 495 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 MALT1Q9UDY8 824 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 HAO1Q9UJM8 370 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 AMDHD2Q9Y303 409 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 FN1P02751 2386 aaKnown RBP13.5□□□□□ -0.25
UBE3B-211ENST00000539843 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF716A6NP11 495 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 SLCO1B7G3V0H7 640 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 TLX2O43763 284 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-211ENST00000539843 IFNA2P01563 188 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 CXCR1P25024 350 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 TACR3P29371 465 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ACVR1BP36896 505 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 SLC1A3P43003 542 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF83P51522 516 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 DSCR9P59020 149 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 GSTA3Q16772 222 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 PGGHGQ32M88 737 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 LIN52Q52LA3 116 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 CLEC2AQ6UVW9 174 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF524Q96C55 264 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 ARL5BQ96KC2 179 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 SORT1Q99523 831 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 DHRS9Q9BPW9 319 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 TAPBPLQ9BX59 468 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 RMND5AQ9H871 391 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 AIG1Q9NVV5 245 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 P2RX2Q9UBL9 471 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 HEATR5AQ86XA9 2040 aa13.49□□□□□ -0.25
UBE3B-211ENST00000539843 SHISA9B4DS77 424 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 M0R1B8 84 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 FAAHO00519 579 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 RFXANKO14593 260 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 RAMP1O60894 148 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 CRLF1O75462 422 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 KRT33AO76009 404 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 WNT11O96014 354 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 IGHV4-39P01824 125 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 IL6P05231 212 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 GPIP06744 558 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 IDO1P14902 403 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 CD40P25942 277 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 TTKP33981 857 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 FABP6P51161 128 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 UFM1P61960 85 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 PHC1P78364 1004 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 CHRNB3Q05901 458 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 BST1Q10588 318 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 FUT5Q11128 374 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 RAB35Q15286 201 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF544Q6NX49 715 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 PAQR6Q6TCH4 344 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 HMGN2P46Q86SG4 172 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 ATG4DQ86TL0 474 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 ADGRG3Q86Y34 549 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 MUC15Q8N387 334 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 ANKFN1Q8N957 763 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 C1orf162Q8NEQ5 155 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 CNOT9Q92600 299 aaKnown RBP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 DNAJA3Q96EY1 480 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 THAP1Q9NVV9 213 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 THUMPD1Q9NXG2 353 aaKnown RBP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 DCTN4Q9UJW0 460 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 OSGIN1Q9UJX0 560 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-211ENST00000539843 JMJD1CQ15652 2540 aa13.48□□□□□ -0.25
UBE3B-211ENST00000539843 GOLGA8QA0A0J9YX86 632 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 GOLGA8OA6NCC3 632 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 CLDN24A6NM45 220 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 GOLGA8NF8WBI6 632 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 HDAC3O15379 428 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 SSX4O60224 188 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 ADAM11O75078 769 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 NCF2P19878 526 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PAX7P23759 505 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 CRISP3P54108 245 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
UBE3B-211ENST00000539843 SYPL1Q16563 259 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 OTUD3Q5T2D3 398 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-211ENST00000539843 MRPL2Q5T653 305 aaKnown RBP13.47□□□□□ -0.25
UBE3B-211ENST00000539843 SEZ6L2Q6UXD5 910 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PRIMA1Q86XR5 153 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 CCDC103Q8IW40 242 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms