RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ANKRD34CP0C6C1 535 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF24P17028 368 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MAP3K8P41279 467 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 LCN6P62502 163 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 EXOSC6Q5RKV6 272 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 LAMTOR1Q6IAA8 161 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PCNPQ8WW12 178 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 RLN3Q8WXF3 142 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 RFT1Q96AA3 541 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 AHCYL2Q96HN2 611 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MARVELD1Q9BSK0 173 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 GSDMCQ9BYG8 508 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PCOLCE2Q9UKZ9 415 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PIAS3Q9Y6X2 628 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 C2orf74A8MZ97 194 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 OIP5O43482 229 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PLPP2O43688 288 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 SCO2O43819 266 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MT-ND4P03905 459 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PRKCAP17252 672 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 HTR2BP41595 481 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 NANOGNBQ7Z5D8 188 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF321PQ8N8H1 164 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 GRPEL2Q8TAA5 225 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 TMEM184BQ9Y519 407 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 FREM2Q5SZK8 3169 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CHP2O43745 196 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 GPANK1O95872 356 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CXCL3P19876 107 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 DRD5P21918 477 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 HLA-DMAP28067 261 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PITPNBP48739 271 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CCR4P51679 360 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 ODF4Q2M2E3 257 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 TMEM44Q2T9K0 475 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 HES5Q5TA89 166 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 Q6ZS52 159 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 THAP4Q8WY91 577 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 PIGKQ92643 395 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CITED4Q96RK1 184 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
UBE3B-210ENST00000539599 LYRM4Q9HD34 91 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 CYP8B1Q9UNU6 501 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 OR6C68A6NDL8 312 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 RPP14O95059 124 aaKnown RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 WISP1O95388 367 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 GABRG2P18507 467 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 HK1P19367 917 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 GIFP27352 417 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 TALDO1P37837 337 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 GZMKP49863 264 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 GDI2P50395 445 aaKnown RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 NTRK2Q16620 822 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 DMKNQ6E0U4 476 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 RNF113BQ8IZP6 322 aaKnown RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 DEDD2Q8WXF8 326 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 RIT1Q92963 219 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 FOXN4Q96NZ1 517 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SLX1AQ9BQ83 275 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 POT1Q9NUX5 634 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 NKIRAS2Q9NYR9 191 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 WDFY4Q6ZS81 3184 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 A0A0J9YY10 115 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 A8MUA0 341 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SLC19A2O60779 497 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 NKX2-2O95096 273 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 FCER2P06734 321 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 RAB3BP20337 219 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF10P21506 573 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SLC6A1P30531 599 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 STX4Q12846 297 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SLC36A2Q495M3 483 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 POMZP3Q6PJE2 187 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SIAH3Q8IW03 269 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SAMD14Q8IZD0 417 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 STACQ99469 402 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 COQ7Q99807 217 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 TSPAN10Q9H1Z9 355 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-210ENST00000539599 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
UBE3B-210ENST00000539599 A0A087WV62 115 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 FABP7O15540 132 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ORC5O43913 435 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 APBB3O95704 486 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms