RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 INHBBP09529 407 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IMPDH2P12268 514 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 UQCRBP14927 111 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ADSLP30566 484 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NTF4P34130 210 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 MAGEA8P43361 318 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PTH2RP49190 550 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CRISP3P54108 245 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NCMAPQ5T1S8 102 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SEZ6L2Q6UXD5 910 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LILRB1Q8NHL6 650 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LRRC8CQ8TDW0 803 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM171Q8WVE6 324 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IGFBPL1Q8WX77 278 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NEUROG1Q92886 237 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 APH1AQ96BI3 265 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM19Q96HH6 336 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ESRP2Q9H6T0 727 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NGBQ9NPG2 151 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TCF7L2Q9NQB0 619 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TRAPPC4Q9Y296 219 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF443Q9Y2A4 671 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PCDHB14Q9Y5E9 798 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DSPPQ9NZW4 1301 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ARID1AO14497 2285 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 POLR3GO15318 223 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF208O43345 1280 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DNPH1O43598 174 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NUDT7P0C024 238 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 COX5AP20674 150 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IDH3AP50213 366 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 STX1BP61266 288 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SLC35A1P78382 337 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 BSPH1Q075Z2 132 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PPA1Q15181 289 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 BIVMQ86UB2 503 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF440Q8IYI8 595 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CIARTQ8N365 385 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CLIP4Q8N3C7 705 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CADM2Q8N3J6 435 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF611Q8N823 705 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 GTF2H4Q92759 462 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 POM121Q96HA1 1249 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ATP6V1G3Q96LB4 118 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 USB1Q9BQ65 265 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 EBF4Q9BQW3 602 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 GSX2Q9BZM3 304 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PAIP1Q9H074 479 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LAMP3Q9UQV4 416 aa16.84■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM247A6NEH6 219 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 DPRXA6NFQ7 191 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 TRIM64A6NGJ6 449 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 TRIM64BA6NI03 449 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 H7C1Q1 480 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 RAD51DO75771 328 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CNOT4O95628 575 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 GGT1P19440 569 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 ACAA2P42765 397 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 SLC16A1P53985 500 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 H3F3AP84243 136 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 RGNQ15493 299 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 FBXW9Q5XUX1 488 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 PRSS57Q6UWY2 283 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 ZNF433Q8N7K0 673 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 KBTBD8Q8NFY9 601 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 MAL2Q969L2 176 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 ADAM19Q9H013 955 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CXorf56Q9H5V9 222 aa16.83■□□□□ 0.28
TNFRSF1A-212ENST00000539372 A0A0G2JPF8 293 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CCT8L1PA6NM43 557 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 HNRNPCL2B2RXH8 293 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 HNRNPCL3B7ZW38 293 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CLIC1O00299 241 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 GPR171O14626 319 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 SMAD7O15105 426 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 HNRNPCL1O60812 293 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 MRPL33O75394 65 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 TGDSO95455 350 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 HNRNPCL4P0DMR1 293 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 PRG2P13727 222 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 HOXB4P17483 251 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CXCR1P25024 350 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 BNIP2Q12982 314 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 LARS2Q15031 903 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 RNF220Q5VTB9 566 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 ADAM5Q6NVV9 412 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CLEC9AQ6UXN8 241 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CASP12Q6UXS9 341 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 MUCL1Q96DR8 90 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 NAA11Q9BSU3 229 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CACYBPQ9HB71 228 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 THUMPD1Q9NXG2 353 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CHST2Q9Y4C5 530 aa16.82■□□□□ 0.28
TNFRSF1A-212ENST00000539372 A0A096LPI6 279 aa16.81■□□□□ 0.28
TNFRSF1A-212ENST00000539372 CIB4A0PJX0 185 aa16.81■□□□□ 0.28
TNFRSF1A-212ENST00000539372 NR5A2O00482 541 aa16.81■□□□□ 0.28
TNFRSF1A-212ENST00000539372 EIF1BO60739 113 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-212ENST00000539372 PGM3O95394 542 aa16.81■□□□□ 0.28
TNFRSF1A-212ENST00000539372 THBS1P07996 1170 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms