RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TM9SF1O15321 606 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 WIPF1O43516 503 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TLX2O43763 284 aaPredicted RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 SSX4O60224 188 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 MRPL33O75394 65 aaKnown RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 CHRM4P08173 479 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 ITGA5P08648 1049 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 CCNA2P20248 432 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 PTAFRP25105 342 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 CD40P25942 277 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TTKP33981 857 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 MAGEA8P43361 318 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 HTR3AP46098 478 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 IDH2P48735 452 aaKnown RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 ZNF83P51522 516 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 FOXG1P55316 489 aaPredicted RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 OR2B6P58173 313 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 H3F3AP84243 136 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 GABRA6Q16445 453 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 AGAP6Q5VW22 663 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 OGFOD2Q6N063 350 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 KLHL17Q6TDP4 642 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 B3GLCTQ6Y288 498 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 RNF130Q86XS8 419 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 CMIPQ8IY22 773 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 KIRREL3Q8IZU9 778 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 MREGQ8N565 214 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 ANKFN1Q8N957 763 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TEX37Q96LM6 180 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TRNT1Q96Q11 434 aaKnown RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 CACNG6Q9BXT2 260 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 SLC38A1Q9H2H9 487 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 MEAF6Q9HAF1 191 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TMEM181Q9P2C4 612 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 MGAT4BQ9UQ53 548 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
VAMP1-206ENST00000538970 CR1P17927 2039 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 NUP214P35658 2090 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 IGHV4-30-2A0A087WSY4 118 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 A0A096LNT2 108 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 TMED7-TICAM2A0A0A6YYA0 188 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 TMEM72A0PK05 275 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 RGS16O15492 202 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 ZNF208O43345 1280 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 ALDOCP09972 364 aaKnown RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 IMPDH2P12268 514 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 BGNP21810 368 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 RPS4Y1P22090 263 aaKnown RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 S100A3P33764 101 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 CDKN2CP42773 168 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 POLR2HP52434 150 aaKnown RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 NUDT6P53370 316 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 NME5P56597 212 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 IRX1P78414 480 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 SYPL1Q16563 259 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 OR7E24Q6IFN5 339 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 SLC22A25Q6T423 547 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 CASP12Q6UXS9 341 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 OR52E4Q8NGH9 312 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 ADAD1Q96M93 576 aaKnown RBP10.99□□□□□ -0.65
VAMP1-206ENST00000538970 MUS81Q96NY9 551 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 DHRS9Q9BPW9 319 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 AMBRA1Q9C0C7 1298 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 CBLN4Q9NTU7 201 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 AIG1Q9NVV5 245 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 POU2F3Q9UKI9 436 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 SLC9A8Q9Y2E8 581 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 TMED7Q9Y3B3 224 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 FLVCR1Q9Y5Y0 555 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 CADP27708 2225 aa10.99□□□□□ -0.65
VAMP1-206ENST00000538970 ZC3H12DA2A288 527 aaKnown RBP10.98□□□□□ -0.65
VAMP1-206ENST00000538970 CCDC154A6NI56 674 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 M0R1B8 84 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 FAAHO00519 579 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 EIF1BO60739 113 aaKnown RBP10.98□□□□□ -0.65
VAMP1-206ENST00000538970 TACR3P29371 465 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 IL12AP29459 219 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 SLC1A3P43003 542 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 UFM1P61960 85 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 SLC35A1P78382 337 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 TXNL4AP83876 142 aaKnown RBP10.98□□□□□ -0.65
VAMP1-206ENST00000538970 SLC25A3Q00325 362 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 MPP2Q14168 576 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 SLC17A1Q14916 467 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 LRRC74BQ6ZQY2 392 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 MUC15Q8N387 334 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 C17orf78Q8N4C9 275 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 TRIML2Q8N7C3 387 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 WDR31Q8NA23 367 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 C1orf162Q8NEQ5 155 aaPredicted RBP10.98□□□□□ -0.65
VAMP1-206ENST00000538970 WDR60Q8WVS4 1066 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 RHNO1Q9BSD3 238 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 INPP5KQ9BT40 448 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 SLC7A10Q9NS82 523 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 PNPOQ9NVS9 261 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms