RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 IGFL2Q6UWQ7 119 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 C10orf53Q8N6V4 93 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 FAM98AQ8NCA5 519 aaKnown RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 OR14L1PQ8NHC6 308 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 GNPDA2Q8TDQ7 276 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 DNAJA3Q96EY1 480 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 MRGPRX4Q96LA9 322 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 NIPSNAP1Q9BPW8 284 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 PAPOLBQ9NRJ5 636 aaKnown RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 SMPD3Q9NY59 655 aaPredicted RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 TMEM5Q9Y2B1 443 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 POFUT2Q9Y2G5 429 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 PCDHGA9Q9Y5G4 932 aaKnown RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 CNTRLQ7Z7A1 2325 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 TRAV17A0A0B4J275 112 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 CBR3O75828 277 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 GASTP01350 101 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ALPLP05186 524 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 TFPIP10646 304 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 PEPDP12955 493 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 CDH2P19022 906 aaPredicted RBP12.8□□□□□ -0.36
CD4-208ENST00000538827 SRD5A2P31213 254 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 RAD23AP54725 363 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.8□□□□□ -0.36
CD4-208ENST00000538827 YRDCQ86U90 279 aaKnown RBP12.8□□□□□ -0.36
CD4-208ENST00000538827 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 POC1BQ8TC44 478 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 SMPDL3BQ92485 455 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ZBTB8AQ96BR9 441 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 NTNG2Q96CW9 530 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ZNF184Q99676 751 aaPredicted RBP12.8□□□□□ -0.36
CD4-208ENST00000538827 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ARHGAP9Q9BRR9 750 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 TTTY12Q9BZ98 90 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 UCK2Q9BZX2 261 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ADAM19Q9H013 955 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 TMEM185BQ9H7F4 350 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 ZNF703Q9H7S9 590 aaPredicted RBP12.8□□□□□ -0.36
CD4-208ENST00000538827 CHRNA9Q9UGM1 479 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 FREM3P0C091 2139 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 FLNCQ14315 2725 aa12.8□□□□□ -0.36
CD4-208ENST00000538827 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 IGKV1D-42A0A075B6H8 117 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 EFCAB9A8MZ26 197 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 ACOT7O00154 380 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SOX14O95416 240 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 AHSA1O95433 338 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SNAP29O95721 258 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 PDGFAP04085 211 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 RFPL3SP0C7P2 107 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SAGP10523 405 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 OMPP47874 163 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 HSPA13P48723 471 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 FOXK1P85037 733 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 PMP22Q01453 160 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 FOXO1Q12778 655 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SELENBP1Q13228 472 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 ZNF169Q14929 603 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 SLC25A53Q5H9E4 307 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 KDM4DQ6B0I6 523 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 ZNF770Q6IQ21 691 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 C3orf33Q6P1S2 294 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 FANK1Q8TC84 345 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SGTBQ96EQ0 304 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SFXN2Q96NB2 322 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 TOR3AQ9H497 397 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SERINC1Q9NRX5 453 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 C20orf141Q9NUB4 165 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 TMEFF2Q9UIK5 374 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 PCDHGB6Q9Y5F9 930 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 SPIN1Q9Y657 262 aaPredicted RBP12.79□□□□□ -0.36
CD4-208ENST00000538827 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
CD4-208ENST00000538827 H3BML4 177 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 ZNF17P17021 662 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 FUT1P19526 365 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 MAKP20794 623 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 IL11P20809 199 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 GSTM3P21266 225 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 POU1F1P28069 291 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 APOBEC1P41238 236 aaKnown RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 EIF1P41567 113 aaKnown RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 RPS5P46782 204 aaKnown RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 GSSP48637 474 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 TPD52P55327 224 aaPredicted RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 PPIAP62937 165 aaKnown RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 PRKCDQ05655 676 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.78□□□□□ -0.36
CD4-208ENST00000538827 RFX4Q33E94 735 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
CD4-208ENST00000538827 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
CD4-208ENST00000538827 LINC00114Q6XXX2 140 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms