RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PGBD2Q6P3X8 592 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 OAFQ86UD1 273 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 EPHX4Q8IUS5 362 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 FADS6Q8N9I5 356 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PFN4Q8NHR9 129 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 C9orf43Q8TAL5 461 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TEX47Q8TBZ9 253 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SLC25A43Q8WUT9 341 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RNF138Q8WVD3 245 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZHX1-C8orf76Q96EF9 292 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ABHD17AQ96GS6 310 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PLEKHA8Q96JA3 519 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 FRMD6Q96NE9 622 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 OR5B2Q96R09 309 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PRSS27Q9BQR3 290 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM43Q9BTV4 400 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TTTY12Q9BZ98 90 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SLC19A3Q9BZV2 496 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DEFB127Q9H1M4 99 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PROK2Q9HC23 129 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZNF71Q9NQZ8 489 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 NANSQ9NR45 359 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MAN2C1Q9NTJ4 1040 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DEPPQ9NTK1 212 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TBC1D23Q9NUY8 699 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 USE1Q9NZ43 259 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 CPAMD8Q8IZJ3 1885 aa9.66□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MED13Q9UHV7 2174 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 A0A087WV48 116 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ENO4A6NNW6 628 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 H0YJX3 145 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 BLOC1S5-TXNDC5H3BN57 136 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 LINC01387J3KSC0 135 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HCN1O60741 890 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MITFO75030 526 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SEMA7AO75326 666 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SNAP29O95721 258 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZNF24P17028 368 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZNF26P17031 533 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 POU3F2P20265 443 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 IDUAP35475 653 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 LIMS1P48059 325 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PLAURQ03405 335 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TSPAN31Q12999 210 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PMS2P3Q13401 168 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MFSD13AQ14CX5 517 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SGCBQ16585 318 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 C1orf140Q5VVS0 124 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 KRT80Q6KB66 452 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RPL13AP3Q6NVV1 102 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 C3orf33Q6P1S2 294 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 C1orf94Q6P1W5 598 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 IGFL2Q6UWQ7 119 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 CASP12Q6UXS9 341 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MAMDC2Q7Z304 686 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 NANOGNBQ7Z5D8 188 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZNF227Q86WZ6 799 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ADGRG3Q86Y34 549 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 FAM83FQ8NEG4 500 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 OR51A7Q8NH64 312 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 OSTF1Q92882 214 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SCMH1Q96GD3 660 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RDH12Q96NR8 316 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 NIPSNAP1Q9BPW8 284 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DGCR6LQ9BY27 220 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TOR3AQ9H497 397 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM185BQ9H7F4 350 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 IMPAD1Q9NX62 359 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ZNF337Q9Y3M9 751 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GMPPBQ9Y5P6 360 aa9.65□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HEATR5AQ86XA9 2040 aa9.65□□□□□ -0.87
TNFRSF1A-211ENST00000538363 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FRYQ5TBA9 3013 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CACNA1BQ00975 2339 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR2M5A3KFT3 312 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PINLYPA6NC86 204 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SULT2B1O00204 365 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SEC14L5O43304 696 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF208O43345 1280 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR7A10O76100 309 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SOX14O95416 240 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NTN1O95631 604 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CRYABP02511 175 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 THY1P04216 161 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ALPLP05186 524 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RFPL3SP0C7P2 107 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OSMP13725 252 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ACADSP16219 412 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF17P17021 662 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 AHCYP23526 432 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NOS3P29474 1203 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MAGEA5P43359 124 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC9A3P48764 834 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms