RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TRIM3O75382 744 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TRAPPC6AO75865 159 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PSMG1O95456 288 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 DHFRP00374 187 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MT-ATP6P00846 226 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 IGHG3P01860 377 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 STATHP02808 62 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 F7P08709 466 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 GPX2P18283 190 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CD247P20963 164 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ABCD3P28288 659 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TALDO1P37837 337 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SOX3P41225 446 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 EMDP50402 254 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CCR9P51686 369 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CAPZA1P52907 286 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FOXA1P55317 472 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CLDN6P56747 220 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SPCS3P61009 180 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 UFM1P61960 85 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ID2Q02363 134 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TGFBR3Q03167 851 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 NFATC3Q12968 1075 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 COL9A2Q14055 689 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MPP2Q14168 576 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SGCBQ16585 318 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZXDCQ2QGD7 858 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC9B1Q4ZJI4 515 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM98BQ52LJ0 330 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 IFI44LQ53G44 452 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RUNDC3AQ59EK9 446 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 NHSL2Q5HYW2 709 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF311Q5JNZ3 666 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 UBE2UQ5VVX9 321 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 HEPHL1Q6MZM0 1159 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 C3orf33Q6P1S2 294 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF613Q6PF04 617 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ARSKQ6UWY0 536 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR4N5Q8IXE1 308 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MICU2Q8IYU8 434 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RNF113BQ8IZP6 322 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 GTPBP8Q8N3Z3 284 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 KIF2BQ8N4N8 673 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF614Q8N883 585 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR7A2PQ8NGA2 310 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM110BQ8TC76 370 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZPLD1Q8TCW7 415 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZFP90Q8TF47 636 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM216AQ8WUB2 273 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 KAT2AQ92830 837 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 WNT2BQ93097 391 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TMBIM1Q969X1 311 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 GTPBP3Q969Y2 492 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ADIPOR1Q96A54 375 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 NXF5Q9H1B4 397 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TUBB1Q9H4B7 451 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZBTB20Q9HC78 741 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 EQTNQ9NQ60 294 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PLSCR4Q9NRQ2 329 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 H2AFY2Q9P0M6 372 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SNX13Q9Y5W8 968 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZFHX2Q9C0A1 2572 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-211ENST00000538253 CCDC160A6NGH7 325 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 CD8B2A6NJW9 211 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 GLOD5A6NK44 160 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ELOA3DA6NLF2 546 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-211ENST00000538253 AGRPO00253 132 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 HCRTR2O43614 444 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 DOK2O60496 412 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 TRMUO75648 421 aaKnown RBP3.26□□□□□ -1.89
PTPN22-211ENST00000538253 KRT36O76013 467 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 IFNW1P05000 195 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 FABP1P07148 127 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 SNRNP70P08621 437 aaKnown RBP3.26□□□□□ -1.89
PTPN22-211ENST00000538253 NID1P14543 1247 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 DRD4P21917 467 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 F8A1P23610 371 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 HTR1EP28566 365 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 VHLP40337 213 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PSME3P61289 254 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 CHRNB3Q05901 458 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ST3GAL3Q11203 375 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PTGR1Q14914 329 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 RGNQ15493 299 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 VMACQ2NL98 169 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 TMEM44Q2T9K0 475 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 TUSC1Q2TAM9 212 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ELOA3BQ3SY89 546 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PRAMEF17Q5VTA0 474 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ZFP1Q6P2D0 407 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 DNM1P34Q6PK57 102 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 FAM111BQ6SJ93 734 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PRSS41Q7RTY9 318 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF551Q7Z340 670 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PRICKLE2Q7Z3G6 844 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 PIGWQ7Z7B1 504 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 CLIP4Q8N3C7 705 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 SLC37A3Q8NCC5 494 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ADPRHL1Q8NDY3 354 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ELOA3Q8NG57 546 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms