RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 TRANK1O15050 2925 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 LRRN3E7EW58 273 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 FLRT2O43155 660 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 UBL3O95164 117 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 TCRBP04435 133 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 CTSBP07858 339 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 S1PR1P21453 382 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SIRPAP78324 504 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 GAS6Q14393 721 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 CEP78Q5JTW2 689 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SLC35F2Q8IXU6 374 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 BMPERQ8N8U9 685 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 LMF2Q9BU23 707 aaKnown RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 GHITMQ9H3K2 345 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 LRRN3Q9H3W5 708 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ABRACLQ9P1F3 81 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ADAM18Q9Y3Q7 739 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ARL6IP5O75915 188 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 PBX2P40425 430 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 MMP15P51511 669 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ACTA2P62736 377 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ACTG2P63267 376 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ULK3Q6PHR2 472 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 LYPD8Q6UX82 237 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 Q6ZSR6 202 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SYS1Q8N2H4 156 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 POMGNT2Q8NAT1 580 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 ZNRF4Q8WWF5 429 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 SGTBQ96EQ0 304 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 GSDMCQ9BYG8 508 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 IRF2BPLQ9H1B7 796 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 FAM60AQ9NP50 221 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 MKKSQ9NPJ1 570 aaPredicted RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 RPS6KB2Q9UBS0 482 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
USP44-203ENST00000537435 NUBP2Q9Y5Y2 271 aa13.16□□□□□ -0.3
USP44-203ENST00000537435 HRKO00198 91 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 STOMP27105 288 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 GIFP27352 417 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP44-203ENST00000537435 GGTLC2Q14390 218 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 NDUFAF6Q330K2 333 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 CDONQ4KMG0 1287 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 CCDC58Q4VC31 144 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 ZNF550Q7Z398 422 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 OR11H7Q8NGC8 314 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
USP44-203ENST00000537435 PDCD1LG2Q9BQ51 273 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 IMPA2O14732 288 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 UCHL1P09936 223 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 EDNRAP25101 427 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 CTHP32929 405 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 RPL4P36578 427 aaKnown RBP13.15□□□□□ -0.3
USP44-203ENST00000537435 UBE2IP63279 158 aaKnown RBP13.15□□□□□ -0.3
USP44-203ENST00000537435 PITPNAQ00169 270 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 PON3Q15166 354 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 C9orf62Q8N4C0 152 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 LRFN5Q96NI6 719 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 ORAI3Q9BRQ5 295 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 ZNF222Q9UK12 451 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 COPS3Q9UNS2 423 aa13.15□□□□□ -0.3
USP44-203ENST00000537435 FAM221BA6H8Z2 402 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
USP44-203ENST00000537435 AKT2P31751 481 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 PSMB10P40306 273 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 NNATQ16517 81 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 ZNF542PQ5EBM4 170 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
USP44-203ENST00000537435 NPSR1Q6W5P4 371 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 ZNF767PQ75MW2 155 aa13.14□□□□□ -0.31
USP44-203ENST00000537435 RCBTB1Q8NDN9 531 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms