RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 PTSQ03393 145 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 GPNMBQ14956 572 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC30A6Q6NXT4 461 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 RSPO2Q6UXX9 243 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TMPRSS11FQ6ZWK6 438 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 PARGQ86W56 976 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 EID2Q8N6I1 236 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ARIH2OSQ8N7S6 290 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 THEM6Q8WUY1 208 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 IMP4Q96G21 291 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC6A18Q96N87 628 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SMG9Q9H0W8 520 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 MAGEH1Q9H213 219 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TAS2R10Q9NYW0 307 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 FBXL4Q9UKA2 621 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 GGT3PA6NGU5 568 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CTDSPLO15194 276 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 RDH16O75452 317 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ADCYAP1P18509 176 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SDC1P18827 310 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 C18orf21Q32NC0 220 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 BEST3Q8N1M1 668 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 IQCF1Q8N6M8 205 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 UBAC2Q8NBM4 344 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 OR5M1Q8NGP8 315 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 OR13C4Q8NGS5 318 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 OR6X1Q8NH79 312 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ASB16Q96NS5 453 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 NECAB3Q96P71 396 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 MYADMQ96S97 322 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TEX101Q9BY14 249 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CTPS2Q9NRF8 586 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ARL5AQ9Y689 179 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF840PA6NDX5 716 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 RNF13O43567 381 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC25A12O75746 678 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 KAT7O95251 611 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SOX18P35713 384 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 TTPAP49638 278 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 FOXK2Q01167 660 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 TANGO2Q6ICL3 276 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 TRIM40Q6P9F5 258 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 ADCK2Q7Z695 626 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 DNAAF1Q8NEP3 725 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 NFKBIDQ8NI38 313 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SUCNR1Q9BXA5 334 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 MMP26Q9NRE1 261 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 LDB2O43679 373 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 APBB3O95704 486 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 PEX11BO96011 259 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF140P52738 457 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 CLINT1Q14677 625 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 HMGN3Q15651 99 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 DNLZQ5SXM8 178 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 ADGRF1Q5T601 910 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 DENND4AQ7Z401 1863 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2AK2Q8NG84 335 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 WNT2BQ93097 391 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC22A18Q96BI1 424 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 PKP4Q99569 1192 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 C19orf43Q9BQ61 176 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 PARPBPQ9NWS1 579 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 C2orf78A6NCI8 922 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 NARSO43776 548 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 NME6O75414 186 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 IGHV2-5P01817 119 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 H1F0P07305 194 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 CDH11P55287 796 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 TCTN1Q2MV58 587 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SAPCD1Q5SSQ6 148 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC25A30Q5SVS4 291 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 CPTPQ5TA50 214 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 MTFR2Q6P444 385 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 TAF8Q7Z7C8 310 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 INO80EQ8NBZ0 244 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 RNF141Q8WVD5 230 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 SPHK2Q9NRA0 654 aa10.09□□□□□ -0.79
CLSTN3-207ENST00000537408 ZSWIM8A7E2V4 1837 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3DA0A087WVF3 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3IA0A087WXS9 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3EA0A087X179 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3KA0A087X1G2 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3FA6NER0 549 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 LOC730098B7Z3J9 87 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3LB9A6J9 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 FMO6PO60774 539 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TRBC1P01850 177 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3HP0C7X1 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 CLUP10909 449 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ADRB3P13945 408 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RAB5AP20339 215 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 IDSP22304 550 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms