RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 G6PC3Q9BUM1 346 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 IER3IP1Q9Y5U9 82 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 EFCAB7A8K855 629 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 NPIPB9F8W1W9 429 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 FLRT2O43155 660 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 HYAL3O43820 417 aaPredicted RBP14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 PPM1BO75688 479 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 OR2B3O76000 313 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 UCHL1P09936 223 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 DRD1P21728 446 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 EVI2BP34910 448 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 BTCP35070 178 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 GDI2P50395 445 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 GALK2Q01415 458 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CEP78Q5JTW2 689 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 DPY19L2P2Q6ZN68 376 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CREB3L2Q70SY1 520 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 OVCH1Q7RTY7 1134 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 GHDCQ8N2G8 530 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 RCBTB1Q8NDN9 531 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 SDR9C7Q8NEX9 313 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 OR14A16Q8NHC5 309 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC37A2Q8TED4 501 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 SNX33Q8WV41 574 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 SGTBQ96EQ0 304 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 DPAGT1Q9H3H5 408 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 COPZ2Q9P299 210 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A087WUJ7 227 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 C7orf66A4D0T2 115 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 OR5K3A6NET4 321 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 HCRTR1O43613 425 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 RABIFP47224 123 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 DIO1P49895 249 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 PSMD4P55036 377 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 HYAL1Q12794 435 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 STX4Q12846 297 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 KIRREL2Q6UWL6 708 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SLITRK4Q8IW52 837 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 ARL14Q8N4G2 192 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 TOMM5Q8N4H5 51 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 ARHGEF39Q8N4T4 335 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 OR13C5Q8NGS8 318 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 OR5H6Q8NGV6 325 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 HAVCR2Q8TDQ0 301 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 PHYHIPQ92561 330 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 MRPL48Q96GC5 212 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SCMH1Q96GD3 660 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 CMTM3Q96MX0 182 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SEMA6CQ9H3T2 930 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 FAM60AQ9NP50 221 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 MRPL39Q9NYK5 338 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 NUBP2Q9Y5Y2 271 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 TRBV2A0A0J9YWF9 115 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 ARPC3O15145 178 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 CTNSO60931 367 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 PRKCAP17252 672 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 ATF1P18846 271 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SRP9P49458 86 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 RPS11P62280 158 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 ISXQ2M1V0 245 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 TMEM92Q6UXU6 159 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 BAIAP2L2Q6UXY1 529 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC35F2Q8IXU6 374 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 RFLNBQ8N5W9 214 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 OR13H1Q8NG92 308 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 YIPF5Q969M3 257 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 MED28Q9H204 178 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 GHITMQ9H3K2 345 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 TEKT2Q9UIF3 430 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 SPATA2Q9UM82 520 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 CAMK2AQ9UQM7 478 aa14.72□□□□□ -0.05
CHMP1A-202ENST00000535997 MCIDASD6RGH6 385 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 TCRBP04435 133 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 GNG2P59768 71 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 PPP1CAP62136 330 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 TFF2Q03403 129 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 TMEM31Q5JXX7 168 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC35D3Q5M8T2 416 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 BCL2L15Q5TBC7 163 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 LAMTOR1Q6IAA8 161 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 SFTPA2Q8IWL1 248 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC22A18ASQ8N1D0 253 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 LRRC17Q8N6Y2 441 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 DDOQ99489 341 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 S1PR5Q9H228 398 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 Q9N2J8 555 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 BRD7Q9NPI1 651 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 NUDT15Q9NV35 164 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 STMN3Q9NZ72 180 aa14.71□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A1W2PPK0 400 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 BLACEA4D250 179 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 ANKRD61A6NGH8 418 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 EPOPA6NHQ4 379 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 PRAMEF26H0Y7S4 382 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 MAGEB4O15481 346 aaPredicted RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 GPRIN2O60269 458 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 RNH1P13489 461 aaKnown RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 ST6GAL1P15907 406 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 RPL4P36578 427 aaKnown RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 SKP1P63208 163 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms