RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 hCG_2039718K7EN88 272 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PDLIM1O00151 329 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 SLC28A1O00337 649 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TBX19O60806 448 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 KRT33AO76009 404 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PMS2P2O95744 297 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 CSTAP01040 98 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TACSTD2P09758 323 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 MYL2P10916 166 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 DDX5P17844 614 aaKnown RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 GIFP27352 417 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 MPGP29372 298 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 SOAT1P35610 550 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 HPCAL1P37235 193 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 CCT3P49368 545 aaKnown RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 PPOXP50336 477 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TUBA1BP68363 451 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TUBA4AP68366 448 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 KIAA0040Q15053 153 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 ADIPOQQ15848 244 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 ADRM1Q16186 407 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 ZSWIM7Q19AV6 140 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 GALNTL6Q49A17 601 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PDLIM3Q53GG5 364 aaPredicted RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 CFAP157Q5JU67 520 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TUBA1AQ71U36 451 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 SPATA21Q7Z572 469 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PEG10Q86TG7 708 aaKnown RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 SVOPLQ8N434 492 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 RIBC1Q8N443 379 aaPredicted RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 OR7A2PQ8NGA2 310 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 OR56A1Q8NGH5 318 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 OR5D16Q8NGK9 328 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 OR5AK3PQ8NH89 298 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 WDR60Q8WVS4 1066 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 ZNF764Q96H86 408 aaPredicted RBP8.04□□□□□ -1.12
PACS1-214ENST00000533811 OR7D2Q96RA2 312 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PLK3Q9H4B4 646 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 TNFRSF12AQ9NP84 129 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 ACER3Q9NUN7 267 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PARPBPQ9NWS1 579 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 FAM53CQ9NYF3 392 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 CHRNA9Q9UGM1 479 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 PCDHB10Q9UN67 800 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 SLC9A8Q9Y2E8 581 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 FLVCR1Q9Y5Y0 555 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
PACS1-214ENST00000533811 WNK2Q9Y3S1 2297 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 CENPVL1A0A0U1RR11 272 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 TLDC2A0PJX2 215 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 TMEM89A2RUT3 159 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 B4DSR2 109 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 NPIPB8E9PQR5 432 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 ETV2O00321 342 aaPredicted RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 CFLARO15519 480 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 PDE5AO76074 875 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 C6orf47O95873 294 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 SHBGP04278 402 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 UROSP10746 265 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 APOBEC1P41238 236 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 ASMTP46597 345 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 COMPP49747 757 aaPredicted RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 SLC16A1P53985 500 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 UBE2NP61088 152 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 RPS26P62854 115 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 DEFA6Q01524 100 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 IL1RL1Q01638 556 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 PDE7AQ13946 482 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 EFNB3Q15768 340 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 LIPMQ5VYY2 423 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 UGT2A3Q6UWM9 527 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 FRMD7Q6ZUT3 714 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 EIF3MQ7L2H7 374 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 R3HCC1LQ7Z5L2 792 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 FAM216AQ8WUB2 273 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 NEU4Q8WWR8 484 aaPredicted RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 METTL2AQ96IZ6 378 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 SDF2Q99470 211 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 NAA11Q9BSU3 229 aaPredicted RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 KATNB1Q9BVA0 655 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 RBM4Q9BWF3 364 aaKnown RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 SAP130Q9H0E3 1048 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 HIF1ANQ9NWT6 349 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 PSMC3IPQ9P2W1 217 aaPredicted RBP8.03□□□□□ -1.12
PACS1-214ENST00000533811 MKLN1Q9UL63 735 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 HDGFL3Q9Y3E1 203 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 GRIP1Q9Y3R0 1128 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 CCL27Q9Y4X3 112 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 PCDHGB1Q9Y5G3 927 aa8.03□□□□□ -1.12
PACS1-214ENST00000533811 A0A096LPE4 126 aa8.02□□□□□ -1.13
PACS1-214ENST00000533811 A0A1W2PPZ6 126 aa8.02□□□□□ -1.13
PACS1-214ENST00000533811 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
PACS1-214ENST00000533811 HMGB1P1B2RPK0 211 aaPredicted RBP8.02□□□□□ -1.13
PACS1-214ENST00000533811 NR5A2O00482 541 aa8.02□□□□□ -1.13
PACS1-214ENST00000533811 ANKRD28O15084 1053 aa8.02□□□□□ -1.13
PACS1-214ENST00000533811 SCAMP2O15127 329 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms