RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 BCO1Q9HAY6 547 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 KLHL13Q9P2N7 655 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 PROCRQ9UNN8 238 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 TRAPPC4Q9Y296 219 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 TEX15Q9BXT5 2789 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 IGHV3-15A0A0B4J1V0 119 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 ZC3H12DA2A288 527 aaKnown RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 TMEM229AB2RXF0 380 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 PRKD3O94806 890 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 FESP07332 822 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CCNA2P20248 432 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CRYBA2P53672 197 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 HOXC5Q00444 222 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 SNTB1Q13884 538 aaKnown RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 ABLIM2Q6H8Q1 611 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 C6orf89Q6UWU4 347 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 PIGWQ7Z7B1 504 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 PATL1Q86TB9 770 aaKnown RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 ATG4DQ86TL0 474 aaPredicted RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 ZNF610Q8N9Z0 462 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 ECSITQ9BQ95 431 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 POTEKPQ9BYX7 375 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 TMEM181Q9P2C4 612 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 M0QX08 132 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 IMPDH2P12268 514 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 CXCR1P25024 350 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 HTR2AP28223 471 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 KIR2DL3P43628 341 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 VEZF1Q14119 521 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 INTS11Q5TA45 600 aaKnown RBP18.22■□□□□ 0.51
CCS-208ENST00000533244 C8orf82Q6P1X6 216 aaPredicted RBP18.22■□□□□ 0.51
CCS-208ENST00000533244 GPR32P1Q8NGA4 272 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 WFDC6Q9BQY6 131 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 TACO1Q9BSH4 297 aaKnown RBP18.22■□□□□ 0.51
CCS-208ENST00000533244 C12orf10Q9HB07 376 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 FAM53CQ9NYF3 392 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 CRIM1Q9NZV1 1036 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 KLHL9Q9P2J3 617 aa18.22■□□□□ 0.51
CCS-208ENST00000533244 TESQ9UGI8 421 aaKnown RBP18.22■□□□□ 0.51
CCS-208ENST00000533244 LRBAP50851 2863 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 NPIPB7O75200 414 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 LGI1O95970 557 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 OPN1SWP03999 348 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 C8BP07358 591 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 CPOXP36551 454 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 CD79BP40259 229 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 KCNJ5P48544 419 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 H3F3AP84243 136 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 PDK3Q15120 406 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 DUSP7Q16829 419 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 ERICH5Q6P6B1 374 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 HACD2Q6Y1H2 254 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 ARPINQ7Z6K5 226 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 TUSC5Q8IXB3 177 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 SMYD1Q8NB12 490 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 FAM222BQ8WU58 562 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 TAMM41Q96BW9 452 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 ARHGDIGQ99819 225 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 PIF1Q9H611 641 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 KLHL28Q9NXS3 571 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 ELOVL5Q9NYP7 299 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 USP22Q9UPT9 525 aa18.21■□□□□ 0.51
CCS-208ENST00000533244 IGKV3D-15A0A087WSY6 115 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 FAM220BPB1ANY3 271 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 TPST2O60704 377 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 YES1P07947 543 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 CD247P20963 164 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 PRDX6P30041 224 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 CCKARP32238 428 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 RGS8P57771 180 aaPredicted RBP18.2■□□□□ 0.5
CCS-208ENST00000533244 TLE4Q04727 773 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 NRF1Q16656 503 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 ZHX1-C8orf76Q96EF9 292 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 DNAJA3Q96EY1 480 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 ZNF559Q9BR84 538 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 TRIM2Q9C040 744 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 MCCC2Q9HCC0 563 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 CMTM6Q9NX76 183 aa18.2■□□□□ 0.5
CCS-208ENST00000533244 TACC2O95359 2948 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 MPDZO75970 2070 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 A0A1B0GWA3 101 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 TUBAL3A6NHL2 446 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 ZNF716A6NP11 495 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 ZNF724A8MTY0 619 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 A8MVM7 634 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 ZNF814B7Z6K7 855 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 AIM2O14862 343 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 FAM27E3Q08E93 113 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 RASGEF1BQ0VAM2 473 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 BNIP2Q12982 314 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 TMEM201Q5SNT2 666 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 NUFIP2Q7Z417 695 aaKnown RBP18.19■□□□□ 0.5
CCS-208ENST00000533244 SLC15A3Q8IY34 581 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 STK35Q8TDR2 534 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 CMTM5Q96DZ9 223 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 EFCAB1Q9HAE3 211 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 SLC13A4Q9UKG4 626 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 AP3M1Q9Y2T2 418 aa18.19■□□□□ 0.5
CCS-208ENST00000533244 FAM221AA4D161 298 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 LIPT2A6NK58 231 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms