RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 HRH3Q9Y5N1 445 aa13.66□□□□□ -0.22
CAPN1-224ENST00000533129 MDC1Q14676 2089 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 HMSDA8MTL9 139 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 SPINT1O43278 529 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 FCMRO60667 390 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 KRT33AO76009 404 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 LAMP2P13473 410 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 IL9P15248 144 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 MC3RP41968 323 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 SEC61A1P61619 476 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 PUS10Q3MIT2 529 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 HEPHL1Q6MZM0 1159 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 OR52I2Q8NH67 350 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 PIGKQ92643 395 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 ACTRT3Q9BYD9 372 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 FBXO9Q9UK97 447 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 SLC35A3Q9Y2D2 325 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 MAKP20794 623 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 PTNP21246 168 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 GDI2P50395 445 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 KIAA1024LP59773 190 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 POU4F2Q12837 409 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 AGERQ15109 404 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 OR5M10Q6IEU7 315 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 MRM1Q6IN84 353 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 FRRS1Q6ZNA5 592 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 TTLQ8NG68 377 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 THEM6Q8WUY1 208 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 SUSD6Q92537 303 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 TRMT61BQ9BVS5 477 aaKnown RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 SLC6A15Q9H2J7 730 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 NRIP3Q9NQ35 241 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 THAP10Q9P2Z0 257 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-224ENST00000533129 ATG4BQ9Y4P1 393 aa13.65□□□□□ -0.22
CAPN1-224ENST00000533129 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 A0A1W2PPK0 400 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 RIIAD1A6NNX1 92 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 PDCD5O14737 125 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 KAT7O95251 611 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 AIFM1O95831 613 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 HIST1H2ABP04908 130 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ADRB1P08588 477 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 PPP3CBP16298 524 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 FUT1P19526 365 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 MPIP34949 423 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ZNF136P52737 540 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 CDK5R1Q15078 307 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ZMYND11Q15326 602 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 SFRP5Q5T4F7 317 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 SLC48A1Q6P1K1 146 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 FAM199XQ6PEV8 388 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ALKAL2Q6UX46 152 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ZNF836Q6ZNA1 936 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 GIMAP5Q96F15 307 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 CES1P1Q9UKY3 287 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 AK6Q9Y3D8 172 aaKnown RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 TRAPPC13A5PLN9 417 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 SULT1B1O43704 296 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 C8orf89P0DMQ9 161 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 F3P13726 295 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 GABRA1P14867 456 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 HIST1H1TP22492 207 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 GDI1P31150 447 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 SIM1P81133 766 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 DPTQ07507 201 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 EIPR1Q53HC9 387 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 PARM1Q6UWI2 310 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 TMUB2Q71RG4 321 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 SSX6Q7RTT6 188 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 FCAMRQ8WWV6 532 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 KLHL31Q9H511 634 aa13.64□□□□□ -0.23
CAPN1-224ENST00000533129 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 PCYT1BQ9Y5K3 369 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-224ENST00000533129 ANKRD20A5PA0PJZ0 165 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 TMEM127O75204 238 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 KHDRBS3O75525 346 aaKnown RBP13.63□□□□□ -0.23
CAPN1-224ENST00000533129 CD1AP06126 327 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 NOS3P29474 1203 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 MRPS10P82664 201 aaKnown RBP13.63□□□□□ -0.23
CAPN1-224ENST00000533129 CEBPEQ15744 281 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 ZIC1Q15915 447 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 ZC3H14Q6PJT7 736 aaKnown RBP13.63□□□□□ -0.23
CAPN1-224ENST00000533129 THSD4Q6ZMP0 1018 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 AMZ2Q86W34 360 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
CAPN1-224ENST00000533129 OR9A2Q8NGT5 310 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms