RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ARMC10Q8N2F6 343 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PGBD5Q8N414 524 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 OR11H4Q8NGC9 324 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SNIP1Q8TAD8 396 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 DTD1Q8TEA8 209 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 RAB7BQ96AH8 199 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 POLDIP3Q9BY77 421 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SYT4Q9H2B2 425 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CLMPQ9H6B4 373 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZFP64Q9NPA5 681 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FSCN3Q9NQT6 498 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM184CQ9NVA4 438 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TAS2R8Q9NYW2 309 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CALML5Q9NZT1 146 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SH2B3Q9UQQ2 575 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 KCNK7Q9Y2U2 307 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 R4GN57 208 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TCF20Q9UGU0 1960 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A0B4J293 547 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A1B0GUH1 482 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ASPDHA6ND91 283 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 OR6C68A6NDL8 312 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 B4DGG1 531 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TSPAN15O95858 294 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 LINC00271P0C7V0 271 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MAOAP21397 527 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ITPKAP23677 461 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 LAP3P28838 519 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PTGER3P43115 390 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RPIAP49247 311 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MTNR1BP49286 362 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SPCS3P61009 180 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 AP1S1P61966 158 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SCAPQ12770 1279 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.41e-6■■□□□ 12.7
TGFBR3-209ENST00000532540 PRRT3Q5FWE3 981 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CYB5R2Q6BCY4 276 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ERN2Q76MJ5 926 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 DPPA4Q7L190 304 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM220AQ7Z4H9 259 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SERPINA9Q86WD7 417 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 KDF1Q8NAX2 398 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 WFIKKN2Q8TEU8 576 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CASTOR1Q8WTX7 329 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC25A36Q96CQ1 311 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TSGA13Q96PP4 275 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ATG10Q9H0Y0 220 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 IKZF5Q9H5V7 419 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 BCO1Q9HAY6 547 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 DYRK1BQ9Y463 629 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RNF215Q9Y6U7 377 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CACNB4O00305 520 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MT-ND4LP03901 98 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CPEP16870 476 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CD34P28906 385 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SDHAP31040 664 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ADH7P40394 386 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PRKAG1P54619 331 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 HNRNPA1L2Q32P51 320 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 LBHQ53QV2 105 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 XKR7Q5GH72 579 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 KCTD11Q693B1 232 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 NOXRED1Q6NXP6 359 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TNFAIP8L2Q6P589 184 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM111BQ6SJ93 734 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ATRAIDQ6UW56 229 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PARS2Q7L3T8 475 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 IQCHQ86VS3 1027 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TPRA1Q86W33 373 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF283Q8N7M2 679 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 NAXEQ8NCW5 288 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 OR4E2Q8NGC2 313 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 BSCL2Q96G97 398 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MRGPRX2Q96LB1 330 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM68Q96MH6 324 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MAP3K3Q99759 626 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM231Q9H6L2 316 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 COA4Q9NYJ1 87 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ABRACLQ9P1F3 81 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 VPS29Q9UBQ0 182 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PLEKHB1Q9UF11 243 aaPredicted RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PCDHGA2Q9Y5H1 932 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 A8MXK9 166 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ACOT7O00154 380 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 QSOX1O00391 747 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 HIST1H2ABP04908 130 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CSN2P05814 226 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ANXA7P20073 488 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ITGB7P26010 798 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ABCD3P28288 659 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms