RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CLDN17P56750 224 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 LTB4RQ15722 352 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 NTRK2Q16620 822 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 TP53I3Q53FA7 332 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 VWA2Q5GFL6 755 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 OTUD1Q5VV17 481 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 IGFN1Q86VF2 1251 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF687Q8N1G0 1237 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 OR5W2Q8NH69 310 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 GCDHQ92947 438 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 UBXN10Q96LJ8 280 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 RDH8Q9NYR8 311 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 TESQ9UGI8 421 aaKnown RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 UBE2J1Q9Y385 318 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 LAMA4Q16363 1823 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 MYO7AQ13402 2215 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 TNS1Q9HBL0 1735 aaKnown RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 CISD3P0C7P0 127 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 CBLL1Q75N03 491 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 C8orf44Q96CB5 159 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 EGLN2Q96KS0 407 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 HTR3BO95264 441 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 HEXAP06865 529 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 FCGR2AP12318 317 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 SLC2A5P22732 501 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 PPIAP62937 165 aaKnown RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 BDH1Q02338 343 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 OR1Q1Q15612 314 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 SLC48A1Q6P1K1 146 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 GPR148Q8TDV2 347 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 ADAMTS16Q8TE57 1224 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 ZC3HAV1LQ96H79 300 aaKnown RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 PKMYT1Q99640 499 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 P2RY12Q9H244 342 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 CHST8Q9H2A9 424 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 MAB21L2Q9Y586 359 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 SCGB2A1O75556 95 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 IFNA5P01569 189 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 COL9A1P20849 921 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 GCAP28676 217 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 MAGEA3P43357 314 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF81P51508 661 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 PFN3P60673 137 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 HOXC5Q00444 222 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 SLC10A1Q14973 349 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 SBSNQ6UWP8 590 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 GDPGP1Q6ZNW5 385 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 OR5H2Q8NGV7 314 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 INTS14Q96SY0 518 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 RANBP3Q9H6Z4 567 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-221ENST00000532331 POLE4Q9NR33 117 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 EBF1Q9UH73 591 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 KIAA1551Q9HCM1 1747 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 OR7A17O14581 309 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ATG12O94817 140 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 SORBS2O94875 1100 aaKnown RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 NCS1P62166 190 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ERVK-25P63136 954 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ENTPD8Q5MY95 495 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 MRPL2Q5T653 305 aaKnown RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 HES5Q5TA89 166 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 PLAG1Q6DJT9 500 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 OR11L1Q8NGX0 322 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 FAM71F1Q96KD3 344 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 LMF1Q96S06 567 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 GABRG3Q99928 467 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 SAP130Q9H0E3 1048 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 KLHL9Q9P2J3 617 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 PCDHGA8Q9Y5G5 932 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 URB1O60287 2271 aaKnown RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 AGAP5A6NIR3 686 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 OLFM2O95897 454 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TACR3P29371 465 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 GPR85P60893 370 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 CAMK2DQ13557 499 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 SYPL1Q16563 259 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 FAM83HQ6ZRV2 1179 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF417Q8TAU3 575 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ZFAND2BQ8WV99 257 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 GTF2H4Q92759 462 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TM4SF18Q96CE8 201 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 LHPPQ9H008 270 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TP63Q9H3D4 680 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 PRKRAO75569 313 aaKnown RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 CHRM4P08173 479 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 T-ENOLP0DO92 83 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 UQCRC1P31930 480 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 NXPH1P58417 271 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 HBA1P69905 142 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ERVK13-1Q9NX77 482 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 MGAT4CQ9UBM8 478 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 NUP50Q9UKX7 468 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 MEN1O00255 615 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 DPM1O60762 260 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 DNAJB6O75190 326 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms